RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 NEK1Q96PY6 1258 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 C16orf70Q9BSU1 422 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 ZNF576Q9H609 170 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 GTF2IRD1Q9UHL9 959 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 SLC12A7Q9Y666 1083 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 CCDC69A6NI79 296 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 CDC45O75419 566 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 UBA1P22314 1058 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 PSEN2P49810 448 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 BFSP2Q13515 415 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 PTGISQ16647 500 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 TRIM71Q2Q1W2 868 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 PCNX4Q63HM2 1172 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 APOA5Q6Q788 366 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 USP17L6PQ6QN14 398 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 OTOP2Q7RTS6 562 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 CAGE1Q8TC20 777 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 DHX38Q92620 1227 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 GPKOWQ92917 476 aaPredicted RBP eCLIP11.22□□□□□ -0.613e-8■■■■■ 71.9
TMEM39A-207ENST00000482162 SCLYQ96I15 445 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 SENP7Q9BQF6 1050 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 MTIF3Q9H2K0 278 aaKnown RBP11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 BCAS3Q9H6U6 928 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 FAM217BQ9NTX9 383 aaPredicted RBP11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
TMEM39A-207ENST00000482162 TET1Q8NFU7 2136 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 CHD9Q3L8U1 2897 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 PARNO95453 639 aaKnown RBP11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 GGPS1O95749 300 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 CXCL10P02778 98 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 RCAN1P53805 252 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 HIC1Q14526 733 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 MFSD10Q14728 455 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 ADCK5Q3MIX3 580 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 TRAF7Q6Q0C0 670 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 METTL7BQ6UX53 244 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 NFXL1Q6ZNB6 911 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 PHOSPHO2Q8TCD6 241 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 SPATA33Q96N06 139 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 KATNAL1Q9BW62 490 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 LRRC2Q9BYS8 371 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 PSTPIP2Q9H939 334 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.61
TMEM39A-207ENST00000482162 FIBPO43427 364 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 RXRAP19793 462 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 PTK7Q13308 1070 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 NEDD9Q14511 834 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 KRT32Q14532 448 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 RAB30Q15771 203 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 KIAA0753Q2KHM9 967 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 MYLIPQ8WY64 445 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 AGXT2Q9BYV1 514 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 YBX2Q9Y2T7 364 aaKnown RBP11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 PCDHA11Q9Y5I1 949 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 SLC4A7Q9Y6M7 1214 aa11.2□□□□□ -0.62
TMEM39A-207ENST00000482162 TRIP12Q14669 1992 aaPredicted RBP11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 MYH7BA7E2Y1 1941 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 H3BRB1 525 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 ZNF286BP0CG31 522 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 CKBP12277 381 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 SELPP16109 830 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 ITGB5P18084 799 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 HSPA4P34932 840 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 ADAM17P78536 824 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 SERINC5Q86VE9 423 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 C7orf31Q8N865 590 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 MAFAQ8NHW3 353 aaPredicted RBP11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 SMARCC2Q8TAQ2 1214 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 CUL5Q93034 780 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 WNT8BQ93098 351 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 GPRASP2Q96D09 838 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 GPR20Q99678 358 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 USP26Q9BXU7 913 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 TUT1Q9H6E5 874 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 MLXIPQ9HAP2 919 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 RTEL1Q9NZ71 1219 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 TELO2Q9Y4R8 837 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
TMEM39A-207ENST00000482162 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 CNTNAP5Q8WYK1 1306 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 MAFGO15525 162 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 ZBTB43O43298 467 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms