RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
OPTN-210ENST00000482140 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
OPTN-210ENST00000482140 GLT8D2Q9H1C3 349 aa17■□□□□ 0.31
OPTN-210ENST00000482140 TRPV6Q9H1D0 765 aa17■□□□□ 0.31
OPTN-210ENST00000482140 HIPK3Q9H422 1215 aa17■□□□□ 0.31
OPTN-210ENST00000482140 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
OPTN-210ENST00000482140 BARHL2Q9NY43 387 aa17■□□□□ 0.31
OPTN-210ENST00000482140 PCDHA6Q9UN73 950 aa17■□□□□ 0.31
OPTN-210ENST00000482140 PCDHA8Q9Y5H6 950 aa17■□□□□ 0.31
OPTN-210ENST00000482140 RANBP2P49792 3224 aaKnown RBP17■□□□□ 0.31
OPTN-210ENST00000482140 DOCK5Q9H7D0 1870 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 SMCO2A6NFE2 343 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 STXBP3O00186 592 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 SOX1O00570 391 aaPredicted RBP16.99■□□□□ 0.31
OPTN-210ENST00000482140 ICAM3P32942 547 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 CCT2P78371 535 aaKnown RBP16.99■□□□□ 0.31
OPTN-210ENST00000482140 PPIGQ13427 754 aaKnown RBP eCLIP16.99■□□□□ 0.31
OPTN-210ENST00000482140 NEDD9Q14511 834 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 SHHQ15465 462 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 TEX2Q8IWB9 1127 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 KATNAL1Q9BW62 490 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 NOD1Q9Y239 953 aa16.99■□□□□ 0.31
OPTN-210ENST00000482140 SPATA31C2B4DYI2 1134 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 NOP56O00567 594 aaKnown RBP16.98■□□□□ 0.31
OPTN-210ENST00000482140 SCG2P13521 617 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 PDIA3P30101 505 aaKnown RBP16.98■□□□□ 0.31
OPTN-210ENST00000482140 CYP2C18P33260 490 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 SP2Q02086 613 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 PTPN11Q06124 597 aaPredicted RBP16.98■□□□□ 0.31
OPTN-210ENST00000482140 TOB2Q14106 344 aaPredicted RBP16.98■□□□□ 0.31
OPTN-210ENST00000482140 PFKFB3Q16875 520 aaPredicted RBP16.98■□□□□ 0.31
OPTN-210ENST00000482140 TYW1BQ6NUM6 668 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 CCDC12Q8WUD4 166 aaPredicted RBP16.98■□□□□ 0.31
OPTN-210ENST00000482140 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 LRCH3Q96II8 777 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 CDHR1Q96JP9 859 aa16.98■□□□□ 0.31
OPTN-210ENST00000482140 TRMT13Q9NUP7 481 aaKnown RBP16.98■□□□□ 0.31
OPTN-210ENST00000482140 PRPF3O43395 683 aaKnown RBP16.97■□□□□ 0.31
OPTN-210ENST00000482140 PPFIA4O75335 1185 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 FOSP01100 380 aaPredicted RBP16.97■□□□□ 0.31
OPTN-210ENST00000482140 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 PSEN2P49810 448 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 EVCP57679 992 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 HSDL1Q3SXM5 330 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 C9orf50Q5SZB4 431 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 CYFIP1Q7L576 1253 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 PHKBQ93100 1093 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 GPRASP2Q96D09 838 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
OPTN-210ENST00000482140 ALG1Q9BT22 464 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 SLC26A6Q9BXS9 759 aa16.97■□□□□ 0.31
OPTN-210ENST00000482140 CPLX1O14810 134 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 CYP2C9P11712 490 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 CSF2RAP15509 400 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 IFNAR1P17181 557 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 ANAPC15P60006 121 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 SEMA3FQ13275 785 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 MFSD10Q14728 455 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 CPLX2Q6PUV4 134 aaKnown RBP16.96■□□□□ 0.31
OPTN-210ENST00000482140 C7orf31Q8N865 590 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 GIMAP8Q8ND71 665 aaPredicted RBP16.96■□□□□ 0.31
OPTN-210ENST00000482140 KAT2BQ92831 832 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 ZNF274Q96GC6 653 aaPredicted RBP16.96■□□□□ 0.31
OPTN-210ENST00000482140 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.31
OPTN-210ENST00000482140 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
OPTN-210ENST00000482140 ANO3Q9BYT9 981 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 NCOA5Q9HCD5 579 aaKnown RBP16.96■□□□□ 0.31
OPTN-210ENST00000482140 C6orf50Q9HD87 102 aa16.96■□□□□ 0.31
OPTN-210ENST00000482140 F2P00734 622 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 EPHB4P54760 987 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 CCL23P55773 120 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 STK3Q13188 491 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 AP3B2Q13367 1082 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 MTMR1Q13613 665 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 PTGISQ16647 500 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 KIAA0753Q2KHM9 967 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 METTL7BQ6UX53 244 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 CCDC148Q8NFR7 591 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 PGBD1Q96JS3 809 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 SENP7Q9BQF6 1050 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 LARP6Q9BRS8 491 aaKnown RBP16.95■□□□□ 0.3
OPTN-210ENST00000482140 UMODL1Q5DID0 1318 aa16.95■□□□□ 0.3
OPTN-210ENST00000482140 ESYT2A0FGR8 921 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 HOXD8P13378 290 aaPredicted RBP16.94■□□□□ 0.3
OPTN-210ENST00000482140 GNA11P29992 359 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 SP4Q02446 784 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 SSRP1Q08945 709 aaKnown RBP16.94■□□□□ 0.3
OPTN-210ENST00000482140 NTRK3Q16288 839 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 PKN1Q16512 942 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 PSRC1Q6PGN9 363 aaPredicted RBP16.94■□□□□ 0.3
OPTN-210ENST00000482140 SESTD1Q86VW0 696 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 CCDC155Q8N6L0 562 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 RETREG2Q8NC44 543 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 IL23AQ9NPF7 189 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 JADE2Q9NQC1 790 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 TMEM260Q9NX78 707 aa16.94■□□□□ 0.3
OPTN-210ENST00000482140 UBIAD1Q9Y5Z9 338 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms