RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	DXO	O77932	396 aa	Known RBP	10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	PFKM	P08237	780 aa		10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	TOP1	P11387	765 aa	Known RBP	10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	SLC16A2	P36021	539 aa		10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	RABGGTB	P53611	331 aa		10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	MRPS5	P82675	430 aa	Known RBP	10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	PURA	Q00577	322 aa	Known RBP	10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	CCDC85B	Q15834	202 aa	Predicted RBP	10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	SYDE2	Q5VT97	1194 aa		10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	WDR11	Q9BZH6	1224 aa		10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	TCP11L1	Q9NUJ3	509 aa		10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	PCDHA11	Q9Y5I1	949 aa		10.12	□□□□□ -0.79
UBE2F-222	ENST00000482096	TNKS	O95271	1327 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	PTPDC1	A2A3K4	754 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	NKRF	O15226	690 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	FGA	P02671	866 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	CYP2C9	P11712	490 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	ATP2A2	P16615	1042 aa	Known RBP	10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	CPT1A	P50416	773 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	MMP16	P51512	607 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	TMEM259	Q4ZIN3	620 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	CLEC4D	Q8WXI8	215 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	EVI5L	Q96CN4	794 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	TMEM47	Q9BQJ4	181 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	MTG1	Q9BT17	334 aa	Predicted RBP	10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	HELLS	Q9NRZ9	838 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	TRMT13	Q9NUP7	481 aa	Known RBP	10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	PNMA2	Q9UL42	364 aa		10.11	□□□□□ -0.79
UBE2F-222	ENST00000482096	LRRC37A2	A6NM11	1700 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096		A6NJR5	290 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	ZBBX	A8MT70	800 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	MYL3	P08590	195 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	PDHB	P11177	359 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	MYOG	P15173	224 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	POU3F3	P20264	500 aa	Predicted RBP	10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	EDNRB	P24530	442 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	TTLL4	Q14679	1199 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	NBPF20	Q3BBV1	942 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	DESI1	Q6ICB0	168 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	NFRKB	Q6P4R8	1299 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	SLC30A10	Q6XR72	485 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	RNF207	Q6ZRF8	634 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	TICAM2	Q86XR7	235 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	DNER	Q8NFT8	737 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	OR6J1	Q8NGC5	347 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	ADAMTS19	Q8TE59	1207 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	LRRN4	Q8WUT4	740 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	TTC14	Q96N46	770 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	TOMM22	Q9NS69	142 aa		10.1	□□□□□ -0.79
UBE2F-222	ENST00000482096	WDR19	Q8NEZ3	1342 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	KPNA6	O60684	536 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	SNHG28	P0DPA3	235 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	CALML3	P27482	149 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	RFC2	P35250	354 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	RPS6	P62753	249 aa	Known RBP	10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	PTPN11	Q06124	597 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	ZNF543	Q08ER8	600 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	PPP2R5B	Q15173	497 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	MCMDC2	Q4G0Z9	681 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	BRDT	Q58F21	947 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	TMEM67	Q5HYA8	995 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	RRP12	Q5JTH9	1297 aa	Known RBP	10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	PPP1R18	Q6NYC8	613 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	DEFB128	Q7Z7B8	93 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	PHOSPHO2	Q8TCD6	241 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	SCFD2	Q8WU76	684 aa		10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	UHRF1	Q96T88	793 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	MPHOSPH6	Q99547	160 aa	Known RBP	10.09	□□□□□ -0.79
UBE2F-222	ENST00000482096	CHD9	Q3L8U1	2897 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	ZMYM6	O95789	1325 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	RAD50	Q92878	1312 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	LCT	P09848	1927 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096		A0A0D9SFI3	127 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096		B4DLN1	442 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	IQCF3	P0C7M6	154 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	HSPD1	P10809	573 aa	Known RBP	10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	PC	P11498	1178 aa	Known RBP	10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	ACTN1	P12814	892 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	MRPL12	P52815	198 aa	Known RBP	10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	PDE1A	P54750	535 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	FAM47C	Q5HY64	1035 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	ANKRD45	Q5TZF3	282 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	LYPD8	Q6UX82	237 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	RETREG2	Q8NC44	543 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	RGS22	Q8NE09	1264 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	COPS5	Q92905	334 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	FAM227B	Q96M60	508 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	SLC9A7	Q96T83	725 aa		10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	FCF1	Q9Y324	198 aa	Known RBP	10.08	□□□□□ -0.8
UBE2F-222	ENST00000482096	MUC3A	Q02505	3323 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	RNF223	E7ERA6	249 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	ARIH2	O95376	493 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	CA3	P07451	260 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	TXN	P10599	105 aa	Known RBP	10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	BMP1	P13497	986 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	HAND2	P61296	217 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	BFSP2	Q13515	415 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	PTPRN	Q16849	979 aa		10.07	□□□□□ -0.8
UBE2F-222	ENST00000482096	GPATCH4	Q5T3I0	446 aa	Known RBP	10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms