RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 DHCR24Q15392 516 aa12.19□□□□□ -0.46
CUL3-209ENST00000481135 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
CUL3-209ENST00000481135 ABI1Q8IZP0 508 aa12.19□□□□□ -0.46
CUL3-209ENST00000481135 ARHGAP44Q17R89 818 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 TIGD5Q53EQ6 642 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 OTOP3Q7RTS5 596 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 C2orf69Q8N8R5 385 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 NETO2Q8NC67 525 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 ZFP64Q9NPA5 681 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 NUDT5Q9UKK9 219 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 ATP8A1Q9Y2Q0 1164 aa12.18□□□□□ -0.46
CUL3-209ENST00000481135 CBX4O00257 560 aa12.17□□□□□ -0.46
CUL3-209ENST00000481135 GAS7O60861 476 aa12.17□□□□□ -0.46
CUL3-209ENST00000481135 NTRK1P04629 796 aa12.17□□□□□ -0.46
CUL3-209ENST00000481135 LACTBP83111 547 aaPredicted RBP12.17□□□□□ -0.46
CUL3-209ENST00000481135 KIR3DS1Q14943 382 aa12.17□□□□□ -0.46
CUL3-209ENST00000481135 GPR19Q15760 415 aa12.17□□□□□ -0.46
CUL3-209ENST00000481135 DCP2Q8IU60 420 aaKnown RBP12.17□□□□□ -0.46
CUL3-209ENST00000481135 CHST14Q8NCH0 376 aa12.17□□□□□ -0.46
CUL3-209ENST00000481135 OVCH1Q7RTY7 1134 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 SIRT2Q8IXJ6 389 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 CISD2Q8N5K1 135 aaKnown RBP12.16□□□□□ -0.46
CUL3-209ENST00000481135 ATL2Q8NHH9 583 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.16□□□□□ -0.46
CUL3-209ENST00000481135 USP7Q93009 1102 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 KIRREL1Q96J84 757 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 CBLCQ9ULV8 474 aa12.16□□□□□ -0.46
CUL3-209ENST00000481135 GLI4P10075 376 aa12.15□□□□□ -0.46
CUL3-209ENST00000481135 PDE6AP16499 860 aa12.15□□□□□ -0.46
CUL3-209ENST00000481135 SLC6A11P48066 632 aa12.15□□□□□ -0.46
CUL3-209ENST00000481135 STRN3Q13033 797 aa12.15□□□□□ -0.46
CUL3-209ENST00000481135 SHISA4Q96DD7 197 aa12.15□□□□□ -0.46
CUL3-209ENST00000481135 BIN1O00499 593 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 BRINP1O60477 761 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 F2P00734 622 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
CUL3-209ENST00000481135 STEAP3Q658P3 488 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 CYP4F22Q6NT55 531 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 ATG4DQ86TL0 474 aaPredicted RBP12.14□□□□□ -0.47
CUL3-209ENST00000481135 PIP4K2CQ8TBX8 421 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 SEC14L1Q92503 715 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 TTC1Q99614 292 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 RNF32Q9H0A6 362 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 B4GALT6Q9UBX8 382 aa12.14□□□□□ -0.47
CUL3-209ENST00000481135 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
CUL3-209ENST00000481135 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
CUL3-209ENST00000481135 CYBBP04839 570 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 MPOP05164 745 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 COL6A2P12110 1019 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 PAQR3Q6TCH7 311 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 ARHGAP36Q6ZRI8 547 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 OSTM1Q86WC4 334 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 NLGN4XQ8N0W4 816 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 PEX11GQ96HA9 241 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 TNFRSF12AQ9NP84 129 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 DSEQ9UL01 958 aa12.13□□□□□ -0.47
CUL3-209ENST00000481135 TRAF5O00463 557 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 EFEMP2O95967 443 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 KRT15P19012 456 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 OCRLQ01968 901 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 NR1I3Q14994 352 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 EMC4Q5J8M3 183 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 HABP4Q5JVS0 413 aaKnown RBP12.12□□□□□ -0.47
CUL3-209ENST00000481135 DDX42Q86XP3 938 aaKnown RBP eCLIP12.12□□□□□ -0.47
CUL3-209ENST00000481135 PHOSPHO1Q8TCT1 267 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 SLC6A17Q9H1V8 727 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 IFT22Q9H7X7 185 aa12.12□□□□□ -0.47
CUL3-209ENST00000481135 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
CUL3-209ENST00000481135 SLC12A8A0AV02 714 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 ZNF561-AS1K7EIQ3 104 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 ZEB2O60315 1214 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 DBHP09172 617 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 CDK11BP21127 795 aaKnown RBP12.11□□□□□ -0.47
CUL3-209ENST00000481135 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
CUL3-209ENST00000481135 ERVFRD-1P60508 538 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 TMEM62Q0P6H9 643 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 STRA8Q7Z7C7 330 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 SMOC1Q9H4F8 434 aa12.11□□□□□ -0.47
CUL3-209ENST00000481135 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
CUL3-209ENST00000481135 JAM2P57087 298 aa12.1□□□□□ -0.47
CUL3-209ENST00000481135 IL2P60568 153 aa12.1□□□□□ -0.47
CUL3-209ENST00000481135 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
CUL3-209ENST00000481135 BOCQ9BWV1 1114 aa12.1□□□□□ -0.47
CUL3-209ENST00000481135 NKRFO15226 690 aaKnown RBP eCLIP12.09□□□□□ -0.47
CUL3-209ENST00000481135 ZBTB7AO95365 584 aa12.09□□□□□ -0.47
CUL3-209ENST00000481135 POU3F3P20264 500 aaPredicted RBP12.09□□□□□ -0.47
CUL3-209ENST00000481135 GALK1P51570 392 aa12.09□□□□□ -0.47
CUL3-209ENST00000481135 HHIPL2Q6UWX4 724 aa12.09□□□□□ -0.47
CUL3-209ENST00000481135 OTOP1Q7RTM1 612 aa12.09□□□□□ -0.47
CUL3-209ENST00000481135 C11orf74Q86VG3 221 aa12.09□□□□□ -0.47
CUL3-209ENST00000481135 TRIM48Q8IWZ4 208 aa12.09□□□□□ -0.47
CUL3-209ENST00000481135 NXPE1Q8N323 547 aa12.09□□□□□ -0.47
CUL3-209ENST00000481135 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
CUL3-209ENST00000481135 ALG1L2C9J202 215 aa12.08□□□□□ -0.48
CUL3-209ENST00000481135 F8W031 263 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms