RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
SNRNP200-205ENST00000480835 WDR11Q9BZH6 1224 aa16.66■□□□□ 0.26
SNRNP200-205ENST00000480835 ADD3Q9UEY8 706 aaKnown RBP16.66■□□□□ 0.26
SNRNP200-205ENST00000480835 KIAA1217Q5T5P2 1943 aa16.66■□□□□ 0.26
SNRNP200-205ENST00000480835 KDM3AQ9Y4C1 1321 aa16.66■□□□□ 0.26
SNRNP200-205ENST00000480835 LOC102724159A0A0B4J2E5 919 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 POTEMA6NI47 508 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 PP2D1A8MPX8 630 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 MAFGO15525 162 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 PEX10O60683 326 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 PSMD10O75832 226 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 MYCLP12524 364 aaPredicted RBP16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 CDC25AP30304 524 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 SREBF2Q12772 1141 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 POSTNQ15063 836 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 PWP2Q15269 919 aaKnown RBP16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 LRCH2Q5VUJ6 765 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 HAUS3Q68CZ6 603 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 SH3RF1Q7Z6J0 888 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 NLRX1Q86UT6 975 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 CDK5RAP3Q96JB5 506 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 MMP19Q99542 508 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 ZNF577Q9BSK1 485 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 STK17AQ9UEE5 414 aa16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 ABT1Q9ULW3 272 aaKnown RBP16.65■□□□□ 0.26
SNRNP200-205ENST00000480835 PLXNB2O15031 1838 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 FCER1AP12319 257 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 ITGB5P18084 799 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 MDM2Q00987 491 aaPredicted RBP16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 TYRO3Q06418 890 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 SPIRE1Q08AE8 756 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 PPP2R5CQ13362 524 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 KCTD2Q14681 263 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 FAM110CQ1W6H9 321 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 HYIQ5T013 277 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 PDXDC2PQ6P474 469 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 GAS2L3Q86XJ1 694 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 KCTD17Q8N5Z5 321 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 ANKRD13CQ8N6S4 541 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 FAM133AQ8N9E0 248 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 CDHR1Q96JP9 859 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 TUBE1Q9UJT0 475 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 VAV3Q9UKW4 847 aa16.64■□□□□ 0.25
SNRNP200-205ENST00000480835 GAS7O60861 476 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 SMC2O95347 1197 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 CAVIN2O95810 425 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 MYL1P05976 194 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 ARP10275 920 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 PLCG1P19174 1290 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 ALDH5A1P51649 535 aaPredicted RBP16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 MTMR1Q13613 665 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 STX1AQ16623 288 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 ABRAQ8N0Z2 381 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 PAGE5Q96GU1 130 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 INPP4AQ96PE3 977 aaPredicted RBP16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 PURBQ96QR8 312 aaKnown RBP16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 TEKT3Q9BXF9 490 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 AGO4Q9HCK5 861 aaKnown RBP16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 KCNH7Q9NS40 1196 aa16.63■□□□□ 0.25
SNRNP200-205ENST00000480835 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 FAM155AB1AL88 458 aaPredicted RBP16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 STRNO43815 780 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 MUTP22033 750 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 CCT6AP40227 531 aaKnown RBP16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 CNTN2Q02246 1040 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 GRB10Q13322 594 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 PNOCQ13519 176 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 STXBP2Q15833 593 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 NCAPH2Q6IBW4 605 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 OTOP1Q7RTM1 612 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 IFNL1Q8IU54 200 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 GJA10Q969M2 543 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 TBC1D22BQ9NU19 505 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 ANO10Q9NW15 660 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 PLXNA1Q9UIW2 1896 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 ADGRA2Q96PE1 1338 aa16.62■□□□□ 0.25
SNRNP200-205ENST00000480835 LOXHD1Q8IVV2 1947 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 EIF3JO75822 258 aaKnown RBP16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 EDNRBP24530 442 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 RPA1P27694 616 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 AMPD3Q01432 767 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 SEMA3FQ13275 785 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 TAF1CQ15572 869 aaPredicted RBP16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 NAALADL2Q58DX5 795 aa16.61■□□□□ 0.25
SNRNP200-205ENST00000480835 NT5DC1Q5TFE4 455 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms