RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 SPATA31A7Q8IWB4 1347 aa11.21□□□□□ -0.62
COMMD4-203ENST00000480484 KIF1CO43896 1103 aaKnown RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 AP1G2O75843 785 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 PLEKP08567 350 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 IGHMBP2P38935 993 aaKnown RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 FNTAP49354 379 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 DNA2P51530 1060 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 SEC24CP53992 1094 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 APBA1Q02410 837 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 IFT88Q13099 833 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 NNTQ13423 1086 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC152Q4G0S7 254 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 KRT26Q7Z3Y9 468 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 ZKSCAN4Q969J2 545 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 LRP2BPQ9P2M1 347 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 XDHP47989 1333 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 FRMD3A2A2Y4 597 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 LDHCP07864 332 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 CDR1P51861 262 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 SPAG1Q07617 926 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 NEDD9Q14511 834 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 RTN1Q16799 776 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 RPAINQ86UA6 219 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 TMEM87BQ96K49 555 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 CCSER2Q9H7U1 834 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 COL1A1P02452 1464 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 CHUKO15111 745 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 KLRK1P26718 216 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 DNAAF5Q86Y56 855 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 CPVLQ9H3G5 476 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 KANSL2Q9H9L4 492 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-203ENST00000480484 KLC4Q9NSK0 619 aa11.2□□□□□ -0.62
COMMD4-203ENST00000480484 DOCK2Q92608 1830 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 TRIM21P19474 475 aaKnown RBP11.19□□□□□ -0.62
COMMD4-203ENST00000480484 ELF1P32519 619 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 GNALP38405 381 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 SF3B2Q13435 895 aaKnown RBP11.19□□□□□ -0.62
COMMD4-203ENST00000480484 PPP2R5AQ15172 486 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 MICALCLQ6ZW33 695 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-203ENST00000480484 RNPC3Q96LT9 517 aaKnown RBP11.19□□□□□ -0.62
COMMD4-203ENST00000480484 AGPAT5Q9NUQ2 364 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 ZNHIT6Q9NWK9 470 aaKnown RBP11.19□□□□□ -0.62
COMMD4-203ENST00000480484 DNAJC6O75061 913 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 ATP2C2O75185 946 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 IFNAR1P17181 557 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 CYP7A1P22680 504 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 MAPK1P28482 360 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-203ENST00000480484 DYNLL1P63167 89 aaKnown RBP11.19□□□□□ -0.62
COMMD4-203ENST00000480484 KIF5AQ12840 1032 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 LRRC41Q15345 812 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 PKN1Q16512 942 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 CEP85LQ5SZL2 805 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 NAA35Q5VZE5 725 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 WDR59Q6PJI9 974 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 IFT81Q8WYA0 676 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 SCLT1Q96NL6 688 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 ZIM3Q96PE6 472 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 INTUQ9ULD6 942 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 ODF2LQ9ULJ1 636 aa11.19□□□□□ -0.62
COMMD4-203ENST00000480484 FSBPO95073 299 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 LSP1P33241 339 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 MCM7P33993 719 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 ALX1Q15699 326 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 AATFQ9NY61 560 aaKnown RBP eCLIP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 PCDHGB7Q9Y5F8 929 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 BRCA1P38398 1863 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CHD4Q14839 1912 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 PARP1P09874 1014 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 HPDP32754 393 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 SGMS1Q86VZ5 419 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CRACR2BQ8N4Y2 399 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 ANKRD13CQ8N6S4 541 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 MB21D1Q8N884 522 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 SPATA4Q8NEY3 305 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC114Q96M63 670 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 NHEJ1Q9H9Q4 299 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 PPANQ9NQ55 473 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 RWDD2AQ9UIY3 292 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 NOVA2Q9UNW9 492 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms