RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 SNAP23O00161 211 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 SERPING1P05155 500 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 CTNNA1P35221 906 aaKnown RBP14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 MTMR3Q13615 1198 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 BYSLQ13895 437 aaKnown RBP14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 HLTFQ14527 1009 aaKnown RBP eCLIP14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 UAP1Q16222 522 aaPredicted RBP14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 TBC1D22AQ8WUA7 517 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 ORC4O43929 436 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 STARD3NLO95772 234 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 FTCDO95954 541 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 TDRD12Q587J7 1177 aaKnown RBP14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 GALNT17Q6IS24 598 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 EP400NLQ6ZTU2 488 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 FMNL3Q8IVF7 1028 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 DAGLBQ8NCG7 672 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 CCT6BQ92526 530 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 FAXDC2Q96IV6 333 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 SCLT1Q96NL6 688 aa14.3□□□□□ -0.12
LYSMD4-206ENST00000479791 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 RAPGEF5Q92565 580 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 SWAP70Q9UH65 585 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 HOXA7P31268 230 aaPredicted RBP14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 LRRC63Q05C16 580 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 DNAJC10Q8IXB1 793 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 FAM212AQ96EL1 285 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 CEP72Q9P209 647 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
LYSMD4-206ENST00000479791 CYP2D7A0A087X1C5 515 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 PPP1R12AO14974 1030 aaPredicted RBP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 SSBP05455 408 aaKnown RBP eCLIP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 KLRC1P26715 233 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 TMOD1P28289 359 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 EHHADHQ08426 723 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 TXNRD1Q16881 649 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 FOXR2Q6PJQ5 311 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 STAG2Q8N3U4 1231 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 SCFD2Q8WU76 684 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 CALR3Q96L12 384 aaKnown RBP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 SLC8A3P57103 927 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 SLC18A3Q16572 532 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 SFMBT2Q5VUG0 894 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 TMC4Q7Z404 712 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 KLHL7Q8IXQ5 586 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 GUF1Q8N442 669 aaKnown RBP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 TAF4BQ92750 862 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 HVCN1Q96D96 273 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 SLC39A2Q9NP94 309 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 ANKRD36CQ5JPF3 1778 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 BAZ2BQ9UIF8 2168 aaKnown RBP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 RTN2O75298 545 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 ZPR1O75312 459 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 CLNS1AP54105 237 aaKnown RBP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 INF2Q27J81 1249 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 CABLES1Q8TDN4 633 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 PBKQ96KB5 322 aa14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 CNOT10Q9H9A5 744 aaKnown RBP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 CNOT8Q9UFF9 292 aaKnown RBP14.28□□□□□ -0.12
LYSMD4-206ENST00000479791 PVALEFA0A1B0GWK0 134 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 BTNL10A8MVZ5 291 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 PPIP5K2O43314 1243 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 DNA2P51530 1060 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 CPLX4Q7Z7G2 160 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 ACTRT1Q8TDG2 376 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 CENPTQ96BT3 561 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 HOOK2Q96ED9 719 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 ATP6V0A2Q9Y487 856 aa14.27□□□□□ -0.12
LYSMD4-206ENST00000479791 MYH1P12882 1939 aa14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 TLR2O60603 784 aa14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 OR52Z1P0C646 297 aa14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 DRD4P21917 467 aa14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 KCNMA1Q12791 1236 aa14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 CRELD2Q6UXH1 353 aaPredicted RBP14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 MAB21L3Q8N8X9 362 aa14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 ANKS1AQ92625 1134 aa14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.13
LYSMD4-206ENST00000479791 NMT2O60551 498 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 ELF3P78545 371 aaPredicted RBP14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 E2F5Q15329 346 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 RPS6KA1Q15418 735 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 MSL1Q68DK7 614 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 LRRC55Q6ZSA7 311 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 UNC13DQ70J99 1090 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 TRIM6Q9C030 488 aaPredicted RBP14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 ABCF2Q9UG63 623 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 PACSIN2Q9UNF0 486 aaPredicted RBP14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 NOVA2Q9UNW9 492 aaKnown RBP14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 ATP6V1G2O95670 118 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 RNASE9P60153 205 aaKnown RBP14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 KIAA0753Q2KHM9 967 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 FAM83BQ5T0W9 1011 aa14.26□□□□□ -0.13
LYSMD4-206ENST00000479791 HPS3Q969F9 1004 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms