RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 HMMRO75330 724 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 MMP3P08254 477 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 TXNP10599 105 aaKnown RBP11.47□□□□□ -0.57
GPNMB-211ENST00000479625 CKBP12277 381 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 EDNRBP24530 442 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 IRS1P35568 1242 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 PDE4BQ07343 736 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 PPARAQ07869 468 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 SCFD2Q8WU76 684 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 AFG1LQ8WV93 481 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 CLEC4DQ8WXI8 215 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 KAT2BQ92831 832 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 MRPL38Q96DV4 380 aaKnown RBP11.47□□□□□ -0.57
GPNMB-211ENST00000479625 DMDP11532 3685 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 TECTAO75443 2155 aa11.47□□□□□ -0.57
GPNMB-211ENST00000479625 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 NKRFO15226 690 aaKnown RBP eCLIP11.46□□□□□ -0.57
GPNMB-211ENST00000479625 RNF113AO15541 343 aaKnown RBP11.46□□□□□ -0.57
GPNMB-211ENST00000479625 KPNA6O60684 536 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 RPS6P62753 249 aaKnown RBP11.46□□□□□ -0.57
GPNMB-211ENST00000479625 RBL2Q08999 1139 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 TCEAL5Q5H9L2 206 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 SYDE2Q5VT97 1194 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 TRAF7Q6Q0C0 670 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 RNF207Q6ZRF8 634 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 CHST3Q7LGC8 479 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 SESTD1Q86VW0 696 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 PRSS33Q8NF86 280 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 KCNH6Q9H252 994 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 MUTYHQ9UIF7 546 aa11.46□□□□□ -0.57
GPNMB-211ENST00000479625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.46□□□□□ -0.57
GPNMB-211ENST00000479625 PLXNA3P51805 1871 aa11.46□□□□□ -0.58
GPNMB-211ENST00000479625 LOC102724159A0A0B4J2E5 919 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 PATL2C9JE40 543 aaKnown RBP11.45□□□□□ -0.58
GPNMB-211ENST00000479625 GNAT2P19087 354 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 ARHGAP1Q07960 439 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 IKBKEQ14164 716 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 PWP2Q15269 919 aaKnown RBP11.45□□□□□ -0.58
GPNMB-211ENST00000479625 CLUL1Q15846 466 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 TRIM71Q2Q1W2 868 aaKnown RBP11.45□□□□□ -0.58
GPNMB-211ENST00000479625 EPC2Q52LR7 807 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 TIGD5Q53EQ6 642 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 ZNF618Q5T7W0 954 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 MYOCDQ8IZQ8 938 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 BANK1Q8NDB2 785 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 PABPC5Q96DU9 382 aaKnown RBP11.45□□□□□ -0.58
GPNMB-211ENST00000479625 LRRCC1Q9C099 1032 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 NAPBQ9H115 298 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 HDAC6Q9UBN7 1215 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 GTF2IRD1Q9UHL9 959 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 MYO7AQ13402 2215 aa11.45□□□□□ -0.58
GPNMB-211ENST00000479625 FOXP2O15409 715 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 ZNF286BP0CG31 522 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 HTRA4P83105 476 aaPredicted RBP11.44□□□□□ -0.58
GPNMB-211ENST00000479625 ZNF200P98182 395 aaPredicted RBP11.44□□□□□ -0.58
GPNMB-211ENST00000479625 LY6KQ17RY6 165 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
GPNMB-211ENST00000479625 CCDC62Q6P9F0 684 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 ADHFE1Q8IWW8 467 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 DCAF4Q8WV16 495 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 ALG1Q9BT22 464 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 ZBTB40Q9NUA8 1239 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 CLDND1Q9NY35 253 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 INSL6Q9Y581 213 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 LAMA4Q16363 1823 aa11.44□□□□□ -0.58
GPNMB-211ENST00000479625 PLXNA4Q9HCM2 1894 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 EFCAB14O75071 495 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 LGR5O75473 907 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 CSPG5O95196 566 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 SLC3A2P08195 630 aaKnown RBP11.43□□□□□ -0.58
GPNMB-211ENST00000479625 LTBRP36941 435 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 FOSBP53539 338 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 DLX2Q07687 328 aaPredicted RBP11.43□□□□□ -0.58
GPNMB-211ENST00000479625 GPM6BQ13491 265 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 HIC1Q14526 733 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 COL19A1Q14993 1142 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 PTPROQ16827 1216 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 BTNL9Q6UXG8 535 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 SEPT14Q6ZU15 432 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 C7orf31Q8N865 590 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 NACAP1Q9BZK3 213 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 NSUN3Q9H649 340 aaKnown RBP11.43□□□□□ -0.58
GPNMB-211ENST00000479625 PRKAG3Q9UGI9 489 aa11.43□□□□□ -0.58
GPNMB-211ENST00000479625 VPS13AQ96RL7 3174 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 H3BNC9 293 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 RANBP6O60518 1105 aaKnown RBP11.42□□□□□ -0.58
GPNMB-211ENST00000479625 UPP2O95045 317 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 PARNO95453 639 aaKnown RBP11.42□□□□□ -0.58
GPNMB-211ENST00000479625 GH1P01241 217 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 AMHP03971 560 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 ZFYP08048 801 aaPredicted RBP11.42□□□□□ -0.58
GPNMB-211ENST00000479625 PTK7Q13308 1070 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 USH1GQ495M9 461 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 DBF4BQ8NFT6 615 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms