RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 TOM1O60784 492 aa27.26■■□□□ 1.95
SYNGAP1-206ENST00000479510 SERPINB2P05120 415 aa27.26■■□□□ 1.95
SYNGAP1-206ENST00000479510 MAGEA1P43355 309 aa27.26■■□□□ 1.95
SYNGAP1-206ENST00000479510 MARSP56192 900 aaKnown RBP27.26■■□□□ 1.95
SYNGAP1-206ENST00000479510 HAS1Q92839 578 aa27.26■■□□□ 1.95
SYNGAP1-206ENST00000479510 NUDT12Q9BQG2 462 aa27.26■■□□□ 1.95
SYNGAP1-206ENST00000479510 GPCPD1Q9NPB8 672 aa27.26■■□□□ 1.95
SYNGAP1-206ENST00000479510 LTBP1Q14766 1721 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 TNNT3P45378 269 aaPredicted RBP27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 FAM26FQ5R3K3 315 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 GOLGA6L1Q8N7Z2 621 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 COA1Q9GZY4 146 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 TSPYL1Q9H0U9 437 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 LUC7LQ9NQ29 371 aaKnown RBP27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 CAPN6Q9Y6Q1 641 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 QSER1Q2KHR3 1735 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 KLRG2A4D1S0 409 aaPredicted RBP27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 ZBTB5O15062 677 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 ZNF185O15231 689 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 CAPN2P17655 700 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 CACNA2D4Q7Z3S7 1137 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 KCNK18Q7Z418 384 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 FAM184BQ9ULE4 1060 aa27.25■■□□□ 1.95
SYNGAP1-206ENST00000479510 PANK4Q9NVE7 773 aa27.24■■□□□ 1.95
SYNGAP1-206ENST00000479510 RNF14Q9UBS8 474 aa27.24■■□□□ 1.95
SYNGAP1-206ENST00000479510 PCDHA12Q9UN75 941 aa27.24■■□□□ 1.95
SYNGAP1-206ENST00000479510 ATF5Q9Y2D1 282 aaPredicted RBP27.24■■□□□ 1.95
SYNGAP1-206ENST00000479510 ZC3H4Q9UPT8 1303 aaKnown RBP27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 GYS1P13807 737 aa27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 CCDC65Q8IXS2 484 aa27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 OSBPL9Q96SU4 736 aa27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 PPP1R11O60927 126 aaPredicted RBP27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 SYF2O95926 243 aaKnown RBP27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 SLC9C1Q4G0N8 1177 aa27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 AENQ8WTP8 325 aaKnown RBP27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 NOX5Q96PH1 765 aa27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 CRACR2AQ9BSW2 395 aa27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 PSTPIP2Q9H939 334 aa27.23■■□□□ 1.95
SYNGAP1-206ENST00000479510 C6orf229H3BNL8 230 aa27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 MARCH6O60337 910 aa27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 RNF40O75150 1001 aa27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 PRPF6O94906 941 aaKnown RBP27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 MOCS3O95396 460 aa27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 KCNMA1Q12791 1236 aa27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 ZC3H3Q8IXZ2 948 aaKnown RBP27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 SP8Q8IXZ3 490 aa27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 MLXIPQ9HAP2 919 aa27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 RNF216Q9NWF9 866 aaPredicted RBP27.22■■□□□ 1.95
SYNGAP1-206ENST00000479510 SERPING1P05155 500 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 USP11P51784 963 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 GTF2IP78347 998 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 HGSNATQ68CP4 663 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 PPP4R3CPQ6ZMV5 832 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 SPATA4Q8NEY3 305 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 SELENOOQ9BVL4 669 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 SHMT1P34896 483 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 C2orf54Q08AI8 447 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 PICALMQ13492 652 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 ECM1Q16610 540 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 UBE2SQ16763 222 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 CCDC40Q4G0X9 1142 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 MCTP2Q6DN12 878 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 MOXD1Q6UVY6 613 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 CCDC17Q96LX7 622 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 FAM204AQ9H8W3 233 aa27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 GREB1LQ9C091 1923 aaPredicted RBP27.21■■□□□ 1.95
SYNGAP1-206ENST00000479510 CYP3A7-CYP3A51PA0A087WV96 503 aa27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 A0A0U1RQG5 324 aaPredicted RBP27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 TRAF5O00463 557 aa27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 CYP3A7P24462 503 aa27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 TNFRSF8P28908 595 aa27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 GLE1Q53GS7 698 aaKnown RBP27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 SFMBT2Q5VUG0 894 aa27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 TANGO6Q9C0B7 1094 aa27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 EHD4Q9H223 541 aa27.2■■□□□ 1.95
SYNGAP1-206ENST00000479510 PAFAH1B1P43034 410 aa27.2■■□□□ 1.94
SYNGAP1-206ENST00000479510 LRRC41Q15345 812 aa27.2■■□□□ 1.94
SYNGAP1-206ENST00000479510 TRIM59Q8IWR1 403 aa27.2■■□□□ 1.94
SYNGAP1-206ENST00000479510 AFAP1L1Q8TED9 768 aa27.2■■□□□ 1.94
SYNGAP1-206ENST00000479510 SMCR8Q8TEV9 937 aaPredicted RBP27.2■■□□□ 1.94
SYNGAP1-206ENST00000479510 MBOAT7Q96N66 472 aa27.2■■□□□ 1.94
SYNGAP1-206ENST00000479510 PCDHA2Q9Y5H9 948 aa27.2■■□□□ 1.94
SYNGAP1-206ENST00000479510 PITPNM2Q9BZ72 1349 aa27.19■■□□□ 1.94
SYNGAP1-206ENST00000479510 HLA-DOAP06340 250 aa27.19■■□□□ 1.94
SYNGAP1-206ENST00000479510 RAD51AP2Q09MP3 1159 aa27.19■■□□□ 1.94
SYNGAP1-206ENST00000479510 DDX4Q9NQI0 724 aaKnown RBP27.19■■□□□ 1.94
SYNGAP1-206ENST00000479510 EDRF1Q3B7T1 1238 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 KCNMB3Q9NPA1 279 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 USP21Q9UK80 565 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 UBR3Q6ZT12 1888 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 FRMD3A2A2Y4 597 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 FAM83BQ5T0W9 1011 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 CCDC181Q5TID7 509 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 HHIPL2Q6UWX4 724 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 SLFN12Q8IYM2 578 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 STK24Q9Y6E0 443 aa27.18■■□□□ 1.94
SYNGAP1-206ENST00000479510 NOL4O94818 638 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 CLSTN1O94985 981 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 PLA2G4BP0C869 781 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms