RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 MRPL11Q9Y3B7 192 aaKnown RBP18.81■□□□□ 0.6
DDX56-210ENST00000479440 MUC6Q6W4X9 2439 aa18.81■□□□□ 0.6
DDX56-210ENST00000479440 KIAA1217Q5T5P2 1943 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 H3BNC9 293 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 THPOP40225 353 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 GPM6BQ13491 265 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 MFSD6Q6ZSS7 791 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 FBXO11Q86XK2 927 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 ADHFE1Q8IWW8 467 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 SEPT8Q92599 483 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 FBXL18Q96ME1 805 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 POP1Q99575 1024 aaKnown RBP18.8■□□□□ 0.6
DDX56-210ENST00000479440 UPF3BQ9BZI7 483 aaKnown RBP18.8■□□□□ 0.6
DDX56-210ENST00000479440 UBA5Q9GZZ9 404 aa18.8■□□□□ 0.6
DDX56-210ENST00000479440 RNF41Q9H4P4 317 aaPredicted RBP18.8■□□□□ 0.6
DDX56-210ENST00000479440 MICAL3Q7RTP6 2002 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 POTEB3A0JP26 581 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 HOXD8P13378 290 aaPredicted RBP18.79■□□□□ 0.6
DDX56-210ENST00000479440 NT5C2P49902 561 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 HAND2P61296 217 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 ZNF200P98182 395 aaPredicted RBP18.79■□□□□ 0.6
DDX56-210ENST00000479440 COL19A1Q14993 1142 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 PLEKHG4Q58EX7 1191 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 KCNV1Q6PIU1 500 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 POTEBQ6S5H4 581 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 SERINC5Q86VE9 423 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 ESR2Q92731 530 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
DDX56-210ENST00000479440 ZBTB47Q9UFB7 747 aaPredicted RBP18.79■□□□□ 0.6
DDX56-210ENST00000479440 CCDC171Q6TFL3 1326 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 BRWD1Q9NSI6 2320 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 NCK2O43639 380 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 CAND2O75155 1236 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 NR3C2P08235 984 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
DDX56-210ENST00000479440 MCMDC2Q4G0Z9 681 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 ASPRV1Q53RT3 343 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 DGKHQ86XP1 1220 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 TMEM192Q8IY95 271 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 TBC1D5Q92609 795 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 SPATA33Q96N06 139 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 CPVLQ9H3G5 476 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 CLDND1Q9NY35 253 aa18.78■□□□□ 0.6
DDX56-210ENST00000479440 PIEZO1Q92508 2521 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 C17orf102A2RUQ5 167 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 C19orf67A6NJJ6 358 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 DHX16O60231 1041 aaKnown RBP18.77■□□□□ 0.6
DDX56-210ENST00000479440 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 QRICH1Q2TAL8 776 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 CCDC178Q5BJE1 867 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 RPAINQ86UA6 219 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 IQCA1Q86XH1 822 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 ADGRF4Q8IZF3 695 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 PNMA1Q8ND90 353 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 TOP1MTQ969P6 601 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 MFSD14AQ96MC6 490 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 KAT14Q9H8E8 782 aa18.77■□□□□ 0.6
DDX56-210ENST00000479440 SALL3Q9BXA9 1300 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 RALGAPA2Q2PPJ7 1873 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 A0A0D9SFI3 127 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 GGPS1O95749 300 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 CFBP00751 764 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 HSDL1Q3SXM5 330 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 CELF3Q5SZQ8 465 aaKnown RBP18.76■□□□□ 0.59
DDX56-210ENST00000479440 TICAM2Q86XR7 235 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 TBC1D10CQ8IV04 446 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 APBB2Q92870 758 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 ATP6V0A1Q93050 837 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 FAM227BQ96M60 508 aa18.76■□□□□ 0.59
DDX56-210ENST00000479440 IFIH1Q9BYX4 1025 aaKnown RBP18.76■□□□□ 0.59
DDX56-210ENST00000479440 NEDD4P46934 1319 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 UPP2O95045 317 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 HIC1Q14526 733 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 MYSM1Q5VVJ2 828 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 HFE2Q6ZVN8 426 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 PDCD2LQ9BRP1 358 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 LMAN2LQ9H0V9 348 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 RWDD3Q9Y3V2 267 aa18.75■□□□□ 0.59
DDX56-210ENST00000479440 CTSHP09668 335 aa18.74■□□□□ 0.59
DDX56-210ENST00000479440 MYCLP12524 364 aaPredicted RBP18.74■□□□□ 0.59
DDX56-210ENST00000479440 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
DDX56-210ENST00000479440 CTNNB1P35222 781 aa18.74■□□□□ 0.59
DDX56-210ENST00000479440 HSD17B4P51659 736 aa18.74■□□□□ 0.59
DDX56-210ENST00000479440 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
DDX56-210ENST00000479440 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
DDX56-210ENST00000479440 C11orf84Q9BUA3 381 aaPredicted RBP18.74■□□□□ 0.59
DDX56-210ENST00000479440 MAP3K20Q9NYL2 800 aaKnown RBP18.74■□□□□ 0.59
DDX56-210ENST00000479440 NLRC5Q86WI3 1866 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 SORBS3O60504 671 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 PARP1P09874 1014 aaKnown RBP18.73■□□□□ 0.59
DDX56-210ENST00000479440 SMIM10L2AP0DMW4 78 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 SMIM10L2BP0DMW5 78 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 TGFB3P10600 412 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 GNAT1P11488 350 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 HOXC8P31273 242 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 IRS1P35568 1242 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 GHRHRQ02643 423 aa18.73■□□□□ 0.59
DDX56-210ENST00000479440 SMAD2Q15796 467 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms