RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 FILIP1Q7Z7B0 1213 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 SMYD4Q8IYR2 804 aaPredicted RBP11.02□□□□□ -0.65
RAD51B-208ENST00000479335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.02□□□□□ -0.65
RAD51B-208ENST00000479335 SLC5A5Q92911 643 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 ZKSCAN4Q969J2 545 aaPredicted RBP11.02□□□□□ -0.65
RAD51B-208ENST00000479335 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.65
RAD51B-208ENST00000479335 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 THAP9Q9H5L6 903 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.65
RAD51B-208ENST00000479335 CTNND2Q9UQB3 1225 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 GDAQ9Y2T3 454 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 ZHX2Q9Y6X8 837 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 RPTORQ8N122 1335 aa11.02□□□□□ -0.65
RAD51B-208ENST00000479335 MYMKA6NI61 221 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 VWA5AO00534 786 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 ATP2A1O14983 1001 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 KCNJ6P48051 423 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 MAP3K9P80192 1104 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 EHHADHQ08426 723 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 PPP2R5CQ13362 524 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 COG2Q14746 738 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.01□□□□□ -0.65
RAD51B-208ENST00000479335 APTXQ7Z2E3 356 aaKnown RBP11.01□□□□□ -0.65
RAD51B-208ENST00000479335 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
RAD51B-208ENST00000479335 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
RAD51B-208ENST00000479335 WDR11Q9BZH6 1224 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 TMOD4Q9NZQ9 345 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
RAD51B-208ENST00000479335 VAV3Q9UKW4 847 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 AFG3L2Q9Y4W6 797 aa11.01□□□□□ -0.65
RAD51B-208ENST00000479335 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
RAD51B-208ENST00000479335 POLR2AP24928 1970 aaKnown RBP11□□□□□ -0.65
RAD51B-208ENST00000479335 PHIPQ8WWQ0 1821 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 FRMPD4Q14CM0 1322 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 PPP1R12BO60237 982 aaPredicted RBP11□□□□□ -0.65
RAD51B-208ENST00000479335 PSMD10O75832 226 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 ALAS1P13196 640 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 EEF1GP26641 437 aaKnown RBP11□□□□□ -0.65
RAD51B-208ENST00000479335 TBX2Q13207 712 aaPredicted RBP11□□□□□ -0.65
RAD51B-208ENST00000479335 ECM1Q16610 540 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 TKFCQ3LXA3 575 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 PRAMEF18Q5VWM3 479 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 SPECC1LQ69YQ0 1117 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 XRRA1Q6P2D8 792 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 CATSPERGQ6ZRH7 1159 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 USP50Q70EL3 339 aaPredicted RBP11□□□□□ -0.65
RAD51B-208ENST00000479335 OTOP1Q7RTM1 612 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 KCNK18Q7Z418 384 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 SULF1Q8IWU6 871 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 GUF1Q8N442 669 aaKnown RBP11□□□□□ -0.65
RAD51B-208ENST00000479335 CCDC112Q8NEF3 446 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 DDX12PQ92771 950 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 DNAJC19Q96DA6 116 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 RIT2Q99578 217 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 MXRA8Q9BRK3 442 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 TUFT1Q9NNX1 390 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 KCND1Q9NSA2 647 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 HOXC10Q9NYD6 342 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 PYCARDQ9ULZ3 195 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 KIAA1024Q9UPX6 916 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 DNM3Q9UQ16 869 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 PARP14Q460N5 1801 aa11□□□□□ -0.65
RAD51B-208ENST00000479335 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 MED24O75448 989 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 PLA2G4BP0C869 781 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 TAL1P17542 331 aaPredicted RBP10.99□□□□□ -0.65
RAD51B-208ENST00000479335 SFPQP23246 707 aaKnown RBP eCLIP10.99□□□□□ -0.653e-6■■■■■ 27.1
RAD51B-208ENST00000479335 LRMPQ12912 555 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 STK4Q13043 487 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 TCP11X2Q5H9J9 407 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 C9orf131Q5VYM1 1079 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 PCNX4Q63HM2 1172 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 NCAPH2Q6IBW4 605 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 CENPPQ6IPU0 288 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 TTI2Q6NXR4 508 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 CATSPER3Q86XQ3 398 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 FAM114A1Q8IWE2 563 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 CCDC65Q8IXS2 484 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 CPXCR1Q8N123 301 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 SYT2Q8N9I0 419 aaPredicted RBP10.99□□□□□ -0.65
RAD51B-208ENST00000479335 CYP2W1Q8TAV3 490 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 P2RX5Q93086 422 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 GJA10Q969M2 543 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 HSD17B14Q9BPX1 270 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 RAVER2Q9HCJ3 691 aaKnown RBP10.99□□□□□ -0.65
RAD51B-208ENST00000479335 INTS13Q9NVM9 706 aa10.99□□□□□ -0.65
RAD51B-208ENST00000479335 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 POTECB2RU33 542 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 NFIBO00712 420 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 KIF20AO95235 890 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 FGFR1OPO95684 399 aaKnown RBP10.98□□□□□ -0.65
RAD51B-208ENST00000479335 SPATA31C1P0DKV0 1188 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 SKILP12757 684 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 YBX3P16989 372 aaKnown RBP eCLIP10.98□□□□□ -0.65
RAD51B-208ENST00000479335 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 CCZ1BP86790 482 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 CCZ1P86791 482 aaPredicted RBP10.98□□□□□ -0.65
RAD51B-208ENST00000479335 LRCH2Q5VUJ6 765 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
RAD51B-208ENST00000479335 B3GNT9Q6UX72 402 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms