RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CYP3A4P08684 503 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 XBP1P17861 261 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 CDK7P50613 346 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 NEDD9Q14511 834 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 UBE2SQ16763 222 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 CELF3Q5SZQ8 465 aaKnown RBP17.7■□□□□ 0.42
C9orf3-217ENST00000479161 TMEM63BQ5T3F8 832 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 MYSM1Q5VVJ2 828 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 NIPA1Q7RTP0 329 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 REXO1Q8N1G1 1221 aaKnown RBP17.7■□□□□ 0.42
C9orf3-217ENST00000479161 PPTC7Q8NI37 304 aa17.7■□□□□ 0.42
C9orf3-217ENST00000479161 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
C9orf3-217ENST00000479161 A0A0U1RQG5 324 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-217ENST00000479161 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
C9orf3-217ENST00000479161 PURAQ00577 322 aaKnown RBP17.69■□□□□ 0.42
C9orf3-217ENST00000479161 LY6KQ17RY6 165 aa17.69■□□□□ 0.42
C9orf3-217ENST00000479161 ANO3Q9BYT9 981 aa17.69■□□□□ 0.42
C9orf3-217ENST00000479161 JADE2Q9NQC1 790 aa17.69■□□□□ 0.42
C9orf3-217ENST00000479161 ST18O60284 1047 aa17.68■□□□□ 0.42
C9orf3-217ENST00000479161 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-217ENST00000479161 MCM2P49736 904 aa17.68■□□□□ 0.42
C9orf3-217ENST00000479161 BEX3Q00994 111 aa17.68■□□□□ 0.42
C9orf3-217ENST00000479161 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
C9orf3-217ENST00000479161 DHX37Q8IY37 1157 aaKnown RBP17.68■□□□□ 0.42
C9orf3-217ENST00000479161 FERMT2Q96AC1 680 aa17.68■□□□□ 0.42
C9orf3-217ENST00000479161 MTG1Q9BT17 334 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-217ENST00000479161 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
C9orf3-217ENST00000479161 PCDHA4Q9UN74 947 aa17.68■□□□□ 0.42
C9orf3-217ENST00000479161 M0R2N6 131 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 ARVCFO00192 962 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 MEIS1O00470 390 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 LARGE1O95461 756 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 ITGB5P18084 799 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 UBA1P22314 1058 aaKnown RBP17.67■□□□□ 0.42
C9orf3-217ENST00000479161 CIITAP33076 1130 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 USP11P51784 963 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 RTP1P59025 263 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 NLRP5P59047 1200 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 IRX5P78411 483 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-217ENST00000479161 SP2Q02086 613 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 SEMA3FQ13275 785 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 DGKDQ16760 1214 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 CEP55Q53EZ4 464 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 CXCL17Q6UXB2 119 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 NSUN7Q8NE18 718 aaKnown RBP17.67■□□□□ 0.42
C9orf3-217ENST00000479161 COPS5Q92905 334 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 MXRA8Q9BRK3 442 aa17.67■□□□□ 0.42
C9orf3-217ENST00000479161 ORC3Q9UBD5 711 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-217ENST00000479161 MMP3P08254 477 aa17.66■□□□□ 0.42
C9orf3-217ENST00000479161 FDPSP14324 419 aaKnown RBP17.66■□□□□ 0.42
C9orf3-217ENST00000479161 ATN1P54259 1190 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-217ENST00000479161 ARHGAP4P98171 946 aa17.66■□□□□ 0.42
C9orf3-217ENST00000479161 PTPN11Q06124 597 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-217ENST00000479161 NPY5RQ15761 445 aa17.66■□□□□ 0.42
C9orf3-217ENST00000479161 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
C9orf3-217ENST00000479161 PHF20Q9BVI0 1012 aa17.66■□□□□ 0.42
C9orf3-217ENST00000479161 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
C9orf3-217ENST00000479161 H0YGN5 161 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 GGPS1O95749 300 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 MTMR1Q13613 665 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 ITGA7Q13683 1181 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 SESTD1Q86VW0 696 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 BLIDQ8IZY5 108 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 NECAB1Q8N987 351 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 MLXIPQ9HAP2 919 aa17.65■□□□□ 0.42
C9orf3-217ENST00000479161 DCDC2CA8MYV0 355 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 KCNA2P16389 499 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 PTGS1P23219 599 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 HMGN5P82970 282 aaKnown RBP17.64■□□□□ 0.41
C9orf3-217ENST00000479161 TLE2Q04725 743 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 TRIM60Q495X7 471 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 JAKMIP3Q5VZ66 844 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 MOXD1Q6UVY6 613 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 C7orf61Q8IZ16 206 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 KATNAL1Q9BW62 490 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 KCNH7Q9NS40 1196 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 GRIN2DO15399 1336 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 NFASCO94856 1347 aa17.64■□□□□ 0.41
C9orf3-217ENST00000479161 KIAA0355O15063 1070 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 F2P00734 622 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 CD4P01730 458 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-217ENST00000479161 ST3GAL1Q11201 340 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 HSDL1Q3SXM5 330 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 FAM126BQ8IXS8 530 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 VTI1AQ96AJ9 217 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 SPATA33Q96N06 139 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 ATP11BQ9Y2G3 1177 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 DOCK5Q9H7D0 1870 aa17.63■□□□□ 0.41
C9orf3-217ENST00000479161 IGLV3-22A0A075B6J6 115 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 CYP3A7-CYP3A51PA0A087WV96 503 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 HAS3O00219 553 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 TLR3O15455 904 aaKnown RBP17.62■□□□□ 0.41
C9orf3-217ENST00000479161 PPFIA3O75145 1194 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 CLTBP09497 229 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 CYP3A7P24462 503 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 BMP8BP34820 402 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms