RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PTPN11Q06124 597 aaPredicted RBP18.26■□□□□ 0.51
GARNL3-215ENST00000478702 PDE4DQ08499 809 aa18.26■□□□□ 0.51
GARNL3-215ENST00000478702 GPNMBQ14956 572 aa18.26■□□□□ 0.51
GARNL3-215ENST00000478702 MCF2L2Q86YR7 1114 aa18.26■□□□□ 0.51
GARNL3-215ENST00000478702 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
GARNL3-215ENST00000478702 PHOSPHO2Q8TCD6 241 aa18.26■□□□□ 0.51
GARNL3-215ENST00000478702 RBAK-RBAKDNI3L0D1 243 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 CALM1P0DP23 149 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 CALM2P0DP24 149 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 CALM3P0DP25 149 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 TXNP10599 105 aaKnown RBP18.25■□□□□ 0.51
GARNL3-215ENST00000478702 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
GARNL3-215ENST00000478702 SKIV2LQ15477 1246 aaKnown RBP18.25■□□□□ 0.51
GARNL3-215ENST00000478702 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
GARNL3-215ENST00000478702 SYTL5Q8TDW5 730 aaPredicted RBP18.25■□□□□ 0.51
GARNL3-215ENST00000478702 ARNTL2Q8WYA1 636 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 TCEANC2Q96MN5 208 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 MPHOSPH6Q99547 160 aaKnown RBP18.25■□□□□ 0.51
GARNL3-215ENST00000478702 COL20A1Q9P218 1284 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 SLC12A7Q9Y666 1083 aa18.25■□□□□ 0.51
GARNL3-215ENST00000478702 PNMA6FA0A0J9YX94 578 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
GARNL3-215ENST00000478702 GTPBP6O43824 516 aaPredicted RBP18.24■□□□□ 0.51
GARNL3-215ENST00000478702 KPNA6O60684 536 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 LPXNO60711 386 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 PLEKHA8P1O95397 391 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 RXRAP19793 462 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 SMARCA1P28370 1054 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 HSD17B4P51659 736 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 TRAF1Q13077 416 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 BRDTQ58F21 947 aaPredicted RBP18.24■□□□□ 0.51
GARNL3-215ENST00000478702 CCDC62Q6P9F0 684 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 APOA5Q6Q788 366 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 MICU3Q86XE3 530 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 RETREG2Q8NC44 543 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 TBC1D5Q92609 795 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 LZTS2Q9BRK4 669 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 FTOQ9C0B1 505 aaKnown RBP eCLIP18.24■□□□□ 0.51
GARNL3-215ENST00000478702 PCDHA1Q9Y5I3 950 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 SNX14Q9Y5W7 946 aa18.24■□□□□ 0.51
GARNL3-215ENST00000478702 HMGB1P09429 215 aaKnown RBP18.23■□□□□ 0.51
GARNL3-215ENST00000478702 GNAQP50148 359 aa18.23■□□□□ 0.51
GARNL3-215ENST00000478702 GRB10Q13322 594 aa18.23■□□□□ 0.51
GARNL3-215ENST00000478702 BFSP2Q13515 415 aa18.23■□□□□ 0.51
GARNL3-215ENST00000478702 AAK1Q2M2I8 961 aa18.23■□□□□ 0.51
GARNL3-215ENST00000478702 RAB11FIP4Q86YS3 637 aa18.23■□□□□ 0.51
GARNL3-215ENST00000478702 NLRC5Q86WI3 1866 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 DOCK5Q9H7D0 1870 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 B4DLN1 442 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 TLL1O43897 1013 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 BAIAP3O94812 1187 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 CFBP00751 764 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 MMP3P08254 477 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 PLA2G5P39877 138 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 MRPL12P52815 198 aaKnown RBP18.22■□□□□ 0.51
GARNL3-215ENST00000478702 PTGISQ16647 500 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 GDF6Q6KF10 455 aaPredicted RBP18.22■□□□□ 0.51
GARNL3-215ENST00000478702 TMTC3Q6ZXV5 915 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 TMCO2Q7Z6W1 182 aaPredicted RBP18.22■□□□□ 0.51
GARNL3-215ENST00000478702 SAMD3Q8N6K7 520 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 AFG1LQ8WV93 481 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
GARNL3-215ENST00000478702 KAT2BQ92831 832 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
GARNL3-215ENST00000478702 TAAR1Q96RJ0 339 aa18.22■□□□□ 0.51
GARNL3-215ENST00000478702 ATG2AQ2TAZ0 1938 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
GARNL3-215ENST00000478702 ARHGAP1Q07960 439 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 LY6KQ17RY6 165 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 SESTD1Q86VW0 696 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 SRBD1Q8N5C6 995 aaKnown RBP18.21■□□□□ 0.51
GARNL3-215ENST00000478702 NSUN6Q8TEA1 469 aaKnown RBP18.21■□□□□ 0.51
GARNL3-215ENST00000478702 RRP36Q96EU6 259 aaKnown RBP18.21■□□□□ 0.51
GARNL3-215ENST00000478702 RMDN3Q96TC7 470 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 EPHX3Q9H6B9 360 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 MAP3K20Q9NYL2 800 aaKnown RBP18.21■□□□□ 0.51
GARNL3-215ENST00000478702 COG5Q9UP83 839 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 NOD1Q9Y239 953 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 CNTNAP5Q8WYK1 1306 aa18.21■□□□□ 0.51
GARNL3-215ENST00000478702 NID2Q14112 1375 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 KIF28PB7ZC32 967 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 RCAN1P53805 252 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 DEFB103AP81534 67 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 FANCBQ8NB91 859 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 CAGE1Q8TC20 777 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 AFAP1L1Q8TED9 768 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 PIBF1Q8WXW3 757 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 IWS1Q96ST2 819 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 C1QTNF1Q9BXJ1 281 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 PXMP2Q9NR77 195 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
GARNL3-215ENST00000478702 BRPF3Q9ULD4 1205 aa18.2■□□□□ 0.5
GARNL3-215ENST00000478702 ZBTB43O43298 467 aa18.19■□□□□ 0.5
GARNL3-215ENST00000478702 NBNO60934 754 aa18.19■□□□□ 0.5
GARNL3-215ENST00000478702 CPA1P15085 419 aa18.19■□□□□ 0.5
GARNL3-215ENST00000478702 EIF2AK2P19525 551 aaKnown RBP18.19■□□□□ 0.5
GARNL3-215ENST00000478702 RBL2Q08999 1139 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms