RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 MAP3K20Q9NYL2 800 aaKnown RBP13.29□□□□□ -0.28
PDCD11-204ENST00000478543 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
PDCD11-204ENST00000478543 CCNT1O60563 726 aaKnown RBP13.28□□□□□ -0.28
PDCD11-204ENST00000478543 TDP2O95551 362 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 MCM7P33993 719 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 SREBF1P36956 1147 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 TRAPPC10P48553 1259 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 ATN1P54259 1190 aaPredicted RBP13.28□□□□□ -0.28
PDCD11-204ENST00000478543 STK38Q15208 465 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 SF3A1Q15459 793 aaKnown RBP13.28□□□□□ -0.28
PDCD11-204ENST00000478543 ARHGEF16Q5VV41 709 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 ANO1Q5XXA6 986 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDCD11-204ENST00000478543 IL31RAQ8NI17 732 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 PXMP2Q9NR77 195 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 LCTP09848 1927 aa13.28□□□□□ -0.28
PDCD11-204ENST00000478543 MYH7BA7E2Y1 1941 aa13.27□□□□□ -0.28
PDCD11-204ENST00000478543 SOWAHBA6NEL2 793 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 EDIL3O43854 480 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 MYCLP12524 364 aaPredicted RBP13.27□□□□□ -0.29
PDCD11-204ENST00000478543 XRCC5P13010 732 aaKnown RBP13.27□□□□□ -0.29
PDCD11-204ENST00000478543 PTPREP23469 700 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 ADORA2AP29274 412 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 ZNF76P36508 570 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 PGM5Q15124 567 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 ATL3Q6DD88 541 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 SPATA32Q96LK8 384 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 SENP6Q9GZR1 1112 aaPredicted RBP13.27□□□□□ -0.29
PDCD11-204ENST00000478543 MAF1Q9H063 256 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
PDCD11-204ENST00000478543 RTEL1Q9NZ71 1219 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 FLRT1Q9NZU1 646 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 CFAP45Q9UL16 551 aa13.27□□□□□ -0.29
PDCD11-204ENST00000478543 DDX49Q9Y6V7 483 aaKnown RBP13.27□□□□□ -0.29
PDCD11-204ENST00000478543 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 ASTN1O14525 1302 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 FOSL2P15408 326 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 NASPP49321 788 aaPredicted RBP13.26□□□□□ -0.29
PDCD11-204ENST00000478543 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 MORN1Q5T089 497 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 NSUN6Q8TEA1 469 aaKnown RBP13.26□□□□□ -0.29
PDCD11-204ENST00000478543 LEO1Q8WVC0 666 aaPredicted RBP13.26□□□□□ -0.29
PDCD11-204ENST00000478543 CRYGNQ8WXF5 182 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 UIMC1Q96RL1 719 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 PDCD2LQ9BRP1 358 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 POLR3EQ9NVU0 708 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 CHD7Q9P2D1 2997 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 DDX25Q9UHL0 483 aaKnown RBP13.26□□□□□ -0.29
PDCD11-204ENST00000478543 MRVI1Q9Y6F6 885 aa13.26□□□□□ -0.29
PDCD11-204ENST00000478543 DNAJC25-GNG10A0A024R161 153 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 STRNO43815 780 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 SLC37A4O43826 429 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 NEMFO60524 1076 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 COBLO75128 1261 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 YEATS4O95619 227 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 CYP3A4P08684 503 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 MARCKSP29966 332 aaPredicted RBP13.25□□□□□ -0.29
PDCD11-204ENST00000478543 CCND2P30279 289 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
PDCD11-204ENST00000478543 USP11P51784 963 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 RTP1P59025 263 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 GRB14Q14449 540 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 PTPAQ15257 358 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 DPP9Q86TI2 863 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 POTEDQ86YR6 584 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 ABRAQ8N0Z2 381 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 LINC00301Q8NCQ3 95 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 DNERQ8NFT8 737 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 NAP1L4Q99733 375 aaKnown RBP13.25□□□□□ -0.29
PDCD11-204ENST00000478543 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
PDCD11-204ENST00000478543 NUDT12Q9BQG2 462 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
PDCD11-204ENST00000478543 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
PDCD11-204ENST00000478543 CEP131Q9UPN4 1083 aa13.25□□□□□ -0.29
PDCD11-204ENST00000478543 TCHHQ07283 1943 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 FAM86B1E9PN63 330 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 TNFRSF10AO00220 468 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 SPTLC2O15270 562 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 NR3C2P08235 984 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 FAM86B2P0C5J1 330 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 GCFC2P16383 781 aaKnown RBP13.24□□□□□ -0.29
PDCD11-204ENST00000478543 PDE4DQ08499 809 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 PTGDRQ13258 359 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 SLC39A14Q15043 492 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 ZNF792Q3KQV3 632 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 PRR16Q569H4 304 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 CYP2W1Q8TAV3 490 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 BADQ92934 168 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 FGD4Q96M96 766 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 TMEM60Q9H2L4 133 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 RCOR1Q9UKL0 485 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 ZNF236Q9UL36 1845 aa13.24□□□□□ -0.29
PDCD11-204ENST00000478543 ZNFX1Q9P2E3 1918 aaKnown RBP13.23□□□□□ -0.29
PDCD11-204ENST00000478543 CYP3A7-CYP3A51PA0A087WV96 503 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms