RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 LINC00482Q8N8I6 264 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 CXorf38Q8TB03 319 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 TEPSINQ96N21 525 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 BDH2Q9BUT1 245 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 ARHGEF4Q9NR80 690 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 PCDHB4Q9Y5E5 795 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 DUSP10Q9Y6W6 482 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 NOBOXO60393 691 aa7.17□□□□□ -1.26
VPS50-213ENST00000477572 DGKIO75912 1065 aa7.17□□□□□ -1.26
VPS50-213ENST00000477572 STK10O94804 968 aaKnown RBP7.17□□□□□ -1.26
VPS50-213ENST00000477572 THBS2P35442 1172 aa7.17□□□□□ -1.26
VPS50-213ENST00000477572 ITGA1P56199 1179 aa7.17□□□□□ -1.26
VPS50-213ENST00000477572 UBXN11Q5T124 520 aa7.17□□□□□ -1.26
VPS50-213ENST00000477572 ZNF761Q86XN6 746 aaPredicted RBP7.17□□□□□ -1.26
VPS50-213ENST00000477572 RBM12BQ8IXT5 1001 aaKnown RBP7.17□□□□□ -1.26
VPS50-213ENST00000477572 KYQ8NBH2 561 aa7.17□□□□□ -1.26
VPS50-213ENST00000477572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS50-213ENST00000477572 AARSD1Q9BTE6 412 aaKnown RBP7.17□□□□□ -1.26
VPS50-213ENST00000477572 NPFFR2Q9Y5X5 522 aa7.17□□□□□ -1.26
VPS50-213ENST00000477572 TCRBV5S2A0A599 114 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 CNR2P34972 360 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 GJA9P57773 515 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 RBM10P98175 930 aaKnown RBP7.16□□□□□ -1.26
VPS50-213ENST00000477572 NSMFQ6X4W1 530 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 OSBP2Q969R2 916 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 ZSWIM3Q96MP5 696 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 KCNJ15Q99712 375 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 CDIP1Q9H305 208 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 EPB41L1Q9H4G0 881 aa7.16□□□□□ -1.26
VPS50-213ENST00000477572 IQCA1LA6NCM1 817 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 CELA3BP08861 270 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 PABPC1P11940 636 aaKnown RBP7.15□□□□□ -1.26
VPS50-213ENST00000477572 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
VPS50-213ENST00000477572 NKX3-2P78367 333 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 PLP2Q04941 152 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 NTRK3Q16288 839 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 MCTP2Q6DN12 878 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 ADAMTS17Q8TE56 1095 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 SGSM3Q96HU1 749 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 GPR27Q9NS67 375 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 MYOTQ9UBF9 498 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 RBPJLQ9UBG7 517 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 ZNF652Q9Y2D9 606 aa7.15□□□□□ -1.26
VPS50-213ENST00000477572 DDX3XO00571 662 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS50-213ENST00000477572 TADA3O75528 432 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 COL6A2P12110 1019 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 GRIN1Q05586 938 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 RGL3Q3MIN7 710 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 SPATC1Q76KD6 591 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 CKAP2LQ8IYA6 745 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 TOE1Q96GM8 510 aaKnown RBP7.14□□□□□ -1.27
VPS50-213ENST00000477572 TANGO6Q9C0B7 1094 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 PFDN2Q9UHV9 154 aa7.14□□□□□ -1.27
VPS50-213ENST00000477572 SLC27A2O14975 620 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 U2SURPO15042 1029 aaKnown RBP7.13□□□□□ -1.27
VPS50-213ENST00000477572 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
VPS50-213ENST00000477572 ADAM9Q13443 819 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 PHF19Q5T6S3 580 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 TEPPQ6URK8 271 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 TMC5Q6UXY8 1006 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 PRRT2Q7Z6L0 340 aaPredicted RBP7.13□□□□□ -1.27
VPS50-213ENST00000477572 TTLL6Q8N841 843 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 ST13P5Q8NFI4 369 aaPredicted RBP7.13□□□□□ -1.27
VPS50-213ENST00000477572 LNPKQ9C0E8 428 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 DTLQ9NZJ0 730 aa7.13□□□□□ -1.27
VPS50-213ENST00000477572 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 LRG1P02750 347 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 FGFR1P11362 822 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 IFRD2Q12894 506 aaPredicted RBP7.12□□□□□ -1.27
VPS50-213ENST00000477572 EMC4Q5J8M3 183 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 PRAMEF18Q5VWM3 479 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 ERICH6BQ5W0A0 696 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 DCAF4Q8WV16 495 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 PCDH18Q9HCL0 1135 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 CROTQ9UKG9 612 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 WASF3Q9UPY6 502 aa7.12□□□□□ -1.27
VPS50-213ENST00000477572 ASXL2Q76L83 1435 aa7.11□□□□□ -1.27
VPS50-213ENST00000477572 KRIT1O00522 736 aa7.11□□□□□ -1.27
VPS50-213ENST00000477572 LTFP02788 710 aa7.11□□□□□ -1.27
VPS50-213ENST00000477572 LBX2Q6XYB7 198 aa7.11□□□□□ -1.27
VPS50-213ENST00000477572 LRRC47Q8N1G4 583 aaKnown RBP7.11□□□□□ -1.27
VPS50-213ENST00000477572 SPATA9Q9BWV2 254 aa7.11□□□□□ -1.27
VPS50-213ENST00000477572 SMOC1Q9H4F8 434 aa7.11□□□□□ -1.27
VPS50-213ENST00000477572 TRAF6Q9Y4K3 522 aa7.11□□□□□ -1.27
VPS50-213ENST00000477572 PDPK1O15530 556 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 ATP2B1P20020 1258 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 GRK2P25098 689 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 GTF2F1P35269 517 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS50-213ENST00000477572 GRK3P35626 688 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 MTERF2Q49AM1 385 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 PRR31Q5SQ13 230 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 ZFYVE27Q5T4F4 411 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 TXNDC5Q8NBS9 432 aaKnown RBP7.1□□□□□ -1.27
VPS50-213ENST00000477572 CLEC4DQ8WXI8 215 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 SLC6A20Q9NP91 592 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 NGRNQ9NPE2 291 aaKnown RBP7.1□□□□□ -1.27
VPS50-213ENST00000477572 ASH2LQ9UBL3 628 aa7.1□□□□□ -1.27
VPS50-213ENST00000477572 NKRFO15226 690 aaKnown RBP eCLIP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms