RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 KCNJ6P48051 423 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 PTK7Q13308 1070 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 KIAA0753Q2KHM9 967 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
HDLBP-236ENST00000477477 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 CELF3Q5SZQ8 465 aaKnown RBP13.17□□□□□ -0.3
HDLBP-236ENST00000477477 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 ASB2Q96Q27 587 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 KIAA1217Q5T5P2 1943 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 FRMPD4Q14CM0 1322 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 MYH6P13533 1939 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 EPOPA6NHQ4 379 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 RFXAPO00287 272 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 SORBS3O60504 671 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 NBNO60934 754 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 TGFB3P10600 412 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 ANTXR2P58335 489 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 WDR5P61964 334 aaKnown RBP13.16□□□□□ -0.3
HDLBP-236ENST00000477477 MRPS5P82675 430 aaKnown RBP13.16□□□□□ -0.3
HDLBP-236ENST00000477477 SP2Q02086 613 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 TAP1Q03518 808 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 CNKSR3Q6P9H4 555 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 MB21D2Q8IYB1 491 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-236ENST00000477477 MICALL1Q8N3F8 863 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 GPKOWQ92917 476 aaPredicted RBP eCLIP13.16□□□□□ -0.3
HDLBP-236ENST00000477477 WNT8BQ93098 351 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
HDLBP-236ENST00000477477 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 TRANK1O15050 2925 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 TNFRSF10AO00220 468 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 TLL1O43897 1013 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 POU3F3P20264 500 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-236ENST00000477477 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-236ENST00000477477 IGDCC4Q8TDY8 1250 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 ARNTL2Q8WYA1 636 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-236ENST00000477477 C16orf70Q9BSU1 422 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-236ENST00000477477 MLXIPQ9HAP2 919 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
HDLBP-236ENST00000477477 MTCH2Q9Y6C9 303 aa13.15□□□□□ -0.3
HDLBP-236ENST00000477477 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-236ENST00000477477 DEFB103AP81534 67 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
HDLBP-236ENST00000477477 HIC1Q14526 733 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 TCTN1Q2MV58 587 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 ADAMTS19Q8TE59 1207 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 PIBF1Q8WXW3 757 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-236ENST00000477477 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
HDLBP-236ENST00000477477 LCHNA4D1U4 455 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 EFCAB14O75071 495 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 STAM2O75886 525 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 DDAH1O94760 285 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 LGALS2P05162 132 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 HOXC8P31273 242 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 ICAM3P32942 547 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-236ENST00000477477 SEMA3FQ13275 785 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 MBTPS1Q14703 1052 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 KRT40Q6A162 431 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 METTL7BQ6UX53 244 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 SPRED2Q7Z698 418 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 TMCO2Q7Z6W1 182 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-236ENST00000477477 SERINC5Q86VE9 423 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 CTCFLQ8NI51 663 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-236ENST00000477477 MTA3Q9BTC8 594 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
HDLBP-236ENST00000477477 XIRP2A4UGR9 3374 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 REV3LO60673 3130 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 C17orf102A2RUQ5 167 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 H3BRB1 525 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
HDLBP-236ENST00000477477 FIBPO43427 364 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 GJB5O95377 273 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 KIF5BP33176 963 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 GRB10Q13322 594 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 IKBKEQ14164 716 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 NEDD9Q14511 834 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 SKIV2LQ15477 1246 aaKnown RBP13.12□□□□□ -0.31
HDLBP-236ENST00000477477 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
HDLBP-236ENST00000477477 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-236ENST00000477477 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 TUT1Q9H6E5 874 aaKnown RBP13.12□□□□□ -0.31
HDLBP-236ENST00000477477 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
HDLBP-236ENST00000477477 SPATA31C2B4DYI2 1134 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms