RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SGPL1O95470 568 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 EN2P19622 333 aaPredicted RBP18.08■□□□□ 0.48
COPS3-207ENST00000477299 BEX3Q00994 111 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 PKP1Q13835 747 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 NBR1Q14596 966 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 SAFBQ15424 915 aaKnown RBP eCLIP18.08■□□□□ 0.48
COPS3-207ENST00000477299 DUSP28Q4G0W2 176 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 CEP55Q53EZ4 464 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 XRRA1Q6P2D8 792 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 FERMT3Q86UX7 667 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 SCFD2Q8WU76 684 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 BRMS1Q9HCU9 246 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 MTMR6Q9Y217 621 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 MRVI1Q9Y6F6 885 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 UBA1P22314 1058 aaKnown RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 U2AF2P26368 475 aaKnown RBP eCLIP18.07■□□□□ 0.48
COPS3-207ENST00000477299 ICAM3P32942 547 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 CIITAP33076 1130 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 MNX1P50219 401 aaPredicted RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 TOB1P50616 345 aaPredicted RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 TTLL4Q14679 1199 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 LETM2Q2VYF4 491 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 PRR16Q569H4 304 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 FOXD4L5Q5VV16 416 aaPredicted RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 MCTP2Q6DN12 878 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 PLA2G4DQ86XP0 818 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 FOXD4L4Q8WXT5 416 aaPredicted RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 CRISPLD2Q9H0B8 497 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 FOXP1Q9H334 677 aaPredicted RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 KCNH7Q9NS40 1196 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 KIF3AQ9Y496 699 aa18.07■□□□□ 0.48
COPS3-207ENST00000477299 RBM19Q9Y4C8 960 aaKnown RBP18.07■□□□□ 0.48
COPS3-207ENST00000477299 MYH15Q9Y2K3 1946 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 SYNRGQ9UMZ2 1314 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 SLC37A4O43826 429 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 ADAMTS4O75173 837 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 DUSP11O75319 330 aaKnown RBP18.06■□□□□ 0.48
COPS3-207ENST00000477299 TFRCP02786 760 aaKnown RBP18.06■□□□□ 0.48
COPS3-207ENST00000477299 RARBP10826 455 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 USP11P51784 963 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 ARHGAP1Q07960 439 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 BECN1Q14457 450 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 NLRX1Q86UT6 975 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 NOSTRINQ8IVI9 506 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 TMEM106CQ9BVX2 250 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 XPNPEP3Q9NQH7 507 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 OGDHLQ9ULD0 1010 aa18.06■□□□□ 0.48
COPS3-207ENST00000477299 FIBPO43427 364 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 STAM2O75886 525 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 GGPS1O95749 300 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 KCNA2P16389 499 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 GJA8P48165 433 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 ITGB3BPQ13352 177 aaPredicted RBP18.05■□□□□ 0.48
COPS3-207ENST00000477299 MTMR1Q13613 665 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 CYFIP1Q7L576 1253 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 NEK8Q86SG6 692 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 TLK2Q86UE8 772 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 DIS3LQ8TF46 1054 aaKnown RBP18.05■□□□□ 0.48
COPS3-207ENST00000477299 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 MBOAT7Q96N66 472 aa18.05■□□□□ 0.48
COPS3-207ENST00000477299 AGO4Q9HCK5 861 aaKnown RBP18.05■□□□□ 0.48
COPS3-207ENST00000477299 CYP3A7-CYP3A51PA0A087WV96 503 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 MSH4O15457 936 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 STX6O43752 255 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 CCNT1O60563 726 aaKnown RBP18.04■□□□□ 0.48
COPS3-207ENST00000477299 CYP3A7P24462 503 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 GJA9P57773 515 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 GNL2Q13823 731 aaKnown RBP18.04■□□□□ 0.48
COPS3-207ENST00000477299 LRRC41Q15345 812 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 ZNF174Q15697 407 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 MYSM1Q5VVJ2 828 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 KLHDC9Q8NEP7 349 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 OR6J1Q8NGC5 347 aa18.04■□□□□ 0.48
COPS3-207ENST00000477299 UPF3AQ9H1J1 476 aaKnown RBP18.04■□□□□ 0.48
COPS3-207ENST00000477299 DDX39AO00148 427 aaKnown RBP18.03■□□□□ 0.48
COPS3-207ENST00000477299 DHX15O43143 795 aaKnown RBP18.03■□□□□ 0.48
COPS3-207ENST00000477299 C6orf222P0C671 652 aaPredicted RBP18.03■□□□□ 0.48
COPS3-207ENST00000477299 PDCP20941 246 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 SP4Q02446 784 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 RESTQ13127 1097 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 HSDL1Q3SXM5 330 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 GNPTABQ3T906 1256 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
COPS3-207ENST00000477299 CCSAPQ6IQ19 270 aaPredicted RBP18.03■□□□□ 0.48
COPS3-207ENST00000477299 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 PPP1R13LQ8WUF5 828 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 AFG1LQ8WV93 481 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 ZDHHC9Q9Y397 364 aa18.03■□□□□ 0.48
COPS3-207ENST00000477299 TCHHQ07283 1943 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 MSCO60682 206 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 FARP2O94887 1054 aaPredicted RBP18.02■□□□□ 0.48
COPS3-207ENST00000477299 GH1P01241 217 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 TGFB3P10600 412 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 KCNA10Q16322 511 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 Q4G0T1 1027 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 GNASQ5JWF2 1037 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 NIPA1Q7RTP0 329 aa18.02■□□□□ 0.48
COPS3-207ENST00000477299 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms