RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PSEN2P49810 448 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 BFSP2Q13515 415 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 HSDL1Q3SXM5 330 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 GNPTABQ3T906 1256 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 TMTC3Q6ZXV5 915 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 CCDC82Q8N4S0 544 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 SMARCC2Q8TAQ2 1214 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 MYLIPQ8WY64 445 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 CUL5Q93034 780 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 SPATA33Q96N06 139 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 INPP4AQ96PE3 977 aaPredicted RBP12.45□□□□□ -0.42
SEC13-214ENST00000476597 KATNAL1Q9BW62 490 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 ZNF576Q9H609 170 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 BCAS3Q9H6U6 928 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 MLXIPQ9HAP2 919 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 RTEL1Q9NZ71 1219 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 HDAC6Q9UBN7 1215 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 GTF2IRD1Q9UHL9 959 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 NOD1Q9Y239 953 aa12.45□□□□□ -0.42
SEC13-214ENST00000476597 EYSQ5T1H1 3165 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 SEMA3FQ13275 785 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 MFSD10Q14728 455 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 KIAA0753Q2KHM9 967 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 SYNE3Q6ZMZ3 975 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 DEFB128Q7Z7B8 93 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 C7orf31Q8N865 590 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 KCNB2Q92953 911 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 CCDC136Q96JN2 1154 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 ALG1Q9BT22 464 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 PSTPIP2Q9H939 334 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 MSRAQ9UJ68 235 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 SLC4A7Q9Y6M7 1214 aa12.44□□□□□ -0.42
SEC13-214ENST00000476597 PRUNE2Q8WUY3 3088 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 BAZ2BQ9UIF8 2168 aaKnown RBP12.43□□□□□ -0.42
SEC13-214ENST00000476597 hCG_1642624A0A1W2PR95 340 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 SORBS3O60504 671 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 ZNF286BP0CG31 522 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 NEDD9Q14511 834 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 KRT32Q14532 448 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 RAB30Q15771 203 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 PCNX4Q63HM2 1172 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 APOA5Q6Q788 366 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 MICU3Q86XE3 530 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 CCDC155Q8N6L0 562 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 DHX38Q92620 1227 aaKnown RBP12.43□□□□□ -0.42
SEC13-214ENST00000476597 TCEANC2Q96MN5 208 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 SENP7Q9BQF6 1050 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 C16orf70Q9BSU1 422 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 SCN10AQ9Y5Y9 1956 aa12.43□□□□□ -0.42
SEC13-214ENST00000476597 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 FIBPO43427 364 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 HMGB1P09429 215 aaKnown RBP12.42□□□□□ -0.42
SEC13-214ENST00000476597 SELPP16109 830 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 RBL2Q08999 1139 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 FUT2Q10981 343 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 PTK7Q13308 1070 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 GPNMBQ14956 572 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 METTL7BQ6UX53 244 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 CYFIP1Q7L576 1253 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 USP26Q9BXU7 913 aa12.42□□□□□ -0.42
SEC13-214ENST00000476597 RBM28Q9NW13 759 aaKnown RBP12.42□□□□□ -0.42
SEC13-214ENST00000476597 VCANP13611 3396 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 H3BRB1 525 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 ZBTB43O43298 467 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 LGALS2P05162 132 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 ACTN1P12814 892 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 FOSL2P15408 326 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 ATP2A2P16615 1042 aaKnown RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 HSPA4P34932 840 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 HIC1Q14526 733 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 TRIM71Q2Q1W2 868 aaKnown RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 NLRX1Q86UT6 975 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 MAFAQ8NHW3 353 aaPredicted RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 GPR20Q99678 358 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEC13-214ENST00000476597 TUT1Q9H6E5 874 aaKnown RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 YBX2Q9Y2T7 364 aaKnown RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 PCDHA11Q9Y5I1 949 aa12.41□□□□□ -0.42
SEC13-214ENST00000476597 V9GY48 417 aaPredicted RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 SPTBN5Q9NRC6 3674 aaKnown RBP12.41□□□□□ -0.42
SEC13-214ENST00000476597 NOP56O00567 594 aaKnown RBP12.4□□□□□ -0.42
SEC13-214ENST00000476597 ATP9AO75110 1047 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 PARNO95453 639 aaKnown RBP12.4□□□□□ -0.42
SEC13-214ENST00000476597 CXCL10P02778 98 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 CKBP12277 381 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 ITGB5P18084 799 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 RABGGTBP53611 331 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 RCAN1P53805 252 aa12.4□□□□□ -0.42
SEC13-214ENST00000476597 UBE2SQ16763 222 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms