RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 AP5M1Q9H0R1 490 aa7.86□□□□□ -1.15
NUP58-209ENST00000476553 TESMINQ9Y4I5 508 aa7.86□□□□□ -1.15
NUP58-209ENST00000476553 GRB10Q13322 594 aa7.85□□□□□ -1.15
NUP58-209ENST00000476553 DPY19L1Q2PZI1 675 aa7.85□□□□□ -1.15
NUP58-209ENST00000476553 SEMA4AQ9H3S1 761 aa7.85□□□□□ -1.15
NUP58-209ENST00000476553 DEF6Q9H4E7 631 aa7.85□□□□□ -1.15
NUP58-209ENST00000476553 KLHL42Q9P2K6 505 aa7.85□□□□□ -1.15
NUP58-209ENST00000476553 CGGBP1Q9UFW8 167 aaPredicted RBP7.85□□□□□ -1.15
NUP58-209ENST00000476553 TCAF1Q9Y4C2 921 aa7.85□□□□□ -1.15
NUP58-209ENST00000476553 VAMP4O75379 141 aa7.84□□□□□ -1.15
NUP58-209ENST00000476553 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
NUP58-209ENST00000476553 SLC6A11P48066 632 aa7.84□□□□□ -1.15
NUP58-209ENST00000476553 LDLRAD1Q5T700 205 aa7.84□□□□□ -1.15
NUP58-209ENST00000476553 MBLAC2Q68D91 279 aa7.84□□□□□ -1.15
NUP58-209ENST00000476553 RUFY4Q6ZNE9 571 aa7.84□□□□□ -1.15
NUP58-209ENST00000476553 SPON2Q9BUD6 331 aa7.84□□□□□ -1.15
NUP58-209ENST00000476553 IBSPP21815 317 aaPredicted RBP7.83□□□□□ -1.16
NUP58-209ENST00000476553 PPP2CBP62714 309 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 PPP2CAP67775 309 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 AMPD2Q01433 879 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 CR1LQ2VPA4 569 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 NT5DC4Q86YG4 428 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 SEC14L1Q92503 715 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 FERD3LQ96RJ6 166 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 BRINP2Q9C0B6 783 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 MEGF9Q9H1U4 602 aa7.83□□□□□ -1.16
NUP58-209ENST00000476553 STAT5AP42229 794 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 PRAMEF18Q5VWM3 479 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 SLFN13Q68D06 897 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 METTL16Q86W50 562 aaKnown RBP7.82□□□□□ -1.16
NUP58-209ENST00000476553 DPF3Q92784 378 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 TGIF2Q9GZN2 237 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 GBP3Q9H0R5 595 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 PIF1Q9H611 641 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 NGRNQ9NPE2 291 aaKnown RBP7.82□□□□□ -1.16
NUP58-209ENST00000476553 MARCH2Q9P0N8 246 aa7.82□□□□□ -1.16
NUP58-209ENST00000476553 CYP1A1P04798 512 aaPredicted RBP7.81□□□□□ -1.16
NUP58-209ENST00000476553 TGM1P22735 817 aa7.81□□□□□ -1.16
NUP58-209ENST00000476553 ANAPC15P60006 121 aa7.81□□□□□ -1.16
NUP58-209ENST00000476553 ARHGEF18Q6ZSZ5 1173 aa7.81□□□□□ -1.16
NUP58-209ENST00000476553 ARHGEF39Q8N4T4 335 aa7.81□□□□□ -1.16
NUP58-209ENST00000476553 CAPN10Q9HC96 672 aa7.81□□□□□ -1.16
NUP58-209ENST00000476553 MAGEC2Q9UBF1 373 aaPredicted RBP7.81□□□□□ -1.16
NUP58-209ENST00000476553 PARNO95453 639 aaKnown RBP7.8□□□□□ -1.16
NUP58-209ENST00000476553 KBTBD2Q8IY47 623 aa7.8□□□□□ -1.16
NUP58-209ENST00000476553 MORC4Q8TE76 937 aa7.8□□□□□ -1.16
NUP58-209ENST00000476553 GMLQ99445 158 aa7.8□□□□□ -1.16
NUP58-209ENST00000476553 MMP19Q99542 508 aa7.8□□□□□ -1.16
NUP58-209ENST00000476553 PTPN18Q99952 460 aa7.8□□□□□ -1.16
NUP58-209ENST00000476553 TMEM168Q9H0V1 697 aa7.8□□□□□ -1.16
NUP58-209ENST00000476553 CCSER2Q9H7U1 834 aa7.8□□□□□ -1.16
NUP58-209ENST00000476553 NOP58Q9Y2X3 529 aaKnown RBP7.8□□□□□ -1.16
NUP58-209ENST00000476553 ZNF623O75123 536 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 EPHX1P07099 455 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 THBDP07204 575 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 IRX6P78412 446 aaPredicted RBP7.79□□□□□ -1.16
NUP58-209ENST00000476553 RBL2Q08999 1139 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 FHL2Q14192 279 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 SOGA3Q5TF21 947 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 TMEM87AQ8NBN3 555 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 ZCRB1Q8TBF4 217 aaKnown RBP7.79□□□□□ -1.16
NUP58-209ENST00000476553 Q8TCH9 128 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 ZCCHC14Q8WYQ9 949 aaKnown RBP7.79□□□□□ -1.16
NUP58-209ENST00000476553 RCC1LQ96I51 464 aaKnown RBP7.79□□□□□ -1.16
NUP58-209ENST00000476553 ZSWIM4Q9H7M6 989 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 L2HGDHQ9H9P8 463 aa7.79□□□□□ -1.16
NUP58-209ENST00000476553 IL13P35225 146 aa7.78□□□□□ -1.16
NUP58-209ENST00000476553 PURAQ00577 322 aaKnown RBP7.78□□□□□ -1.16
NUP58-209ENST00000476553 GNL2Q13823 731 aaKnown RBP7.78□□□□□ -1.16
NUP58-209ENST00000476553 SMN1Q16637 294 aaKnown RBP7.78□□□□□ -1.16
NUP58-209ENST00000476553 HEATR6Q6AI08 1181 aaKnown RBP7.78□□□□□ -1.16
NUP58-209ENST00000476553 RIOX2Q8IUF8 465 aa7.78□□□□□ -1.16
NUP58-209ENST00000476553 TEX2Q8IWB9 1127 aa7.78□□□□□ -1.16
NUP58-209ENST00000476553 PMFBP1Q8TBY8 1022 aa7.78□□□□□ -1.16
NUP58-209ENST00000476553 COPS5Q92905 334 aa7.78□□□□□ -1.16
NUP58-209ENST00000476553 METTL5Q9NRN9 209 aaKnown RBP7.78□□□□□ -1.16
NUP58-209ENST00000476553 CLEC1BQ9P126 229 aa7.78□□□□□ -1.16
NUP58-209ENST00000476553 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
NUP58-209ENST00000476553 PPM1BO75688 479 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 MAP4K4O95819 1239 aaPredicted RBP7.77□□□□□ -1.17
NUP58-209ENST00000476553 MLLT6P55198 1093 aaPredicted RBP7.77□□□□□ -1.17
NUP58-209ENST00000476553 TGFB2P61812 414 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 NKX3-2P78367 333 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 HSP90AB2PQ58FF8 381 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 Q8N1Y9 231 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 KLHL36Q8N4N3 616 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 ZSWIM3Q96MP5 696 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 C11orf21Q9P2W6 132 aa7.77□□□□□ -1.17
NUP58-209ENST00000476553 PLS3P13797 630 aa7.76□□□□□ -1.17
NUP58-209ENST00000476553 FANCCQ00597 558 aa7.76□□□□□ -1.17
NUP58-209ENST00000476553 GNPTABQ3T906 1256 aa7.76□□□□□ -1.17
NUP58-209ENST00000476553 MIIPQ5JXC2 388 aa7.76□□□□□ -1.17
NUP58-209ENST00000476553 MILR1Q7Z6M3 343 aa7.76□□□□□ -1.17
NUP58-209ENST00000476553 FGD4Q96M96 766 aa7.76□□□□□ -1.17
NUP58-209ENST00000476553 PHAXQ9H814 394 aaKnown RBP7.76□□□□□ -1.17
NUP58-209ENST00000476553 JADE2Q9NQC1 790 aa7.76□□□□□ -1.17
NUP58-209ENST00000476553 CCDC194A0A1B0GVG4 234 aa7.75□□□□□ -1.17
NUP58-209ENST00000476553 C22orf46C9J442 243 aa7.75□□□□□ -1.17
NUP58-209ENST00000476553 NPIPB8E9PQR5 432 aa7.75□□□□□ -1.17
NUP58-209ENST00000476553 HSD3B2P26439 372 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms