RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 POLR2AP24928 1970 aaKnown RBP21.3■■□□□ 1
SYF2-204ENST00000476231 AKR1B15C9JRZ8 316 aaPredicted RBP21.3■■□□□ 1
SYF2-204ENST00000476231 FAM86B1E9PN63 330 aa21.3■■□□□ 1
SYF2-204ENST00000476231 FAM86B2P0C5J1 330 aa21.3■■□□□ 1
SYF2-204ENST00000476231 TMEM119Q4V9L6 283 aa21.3■■□□□ 1
SYF2-204ENST00000476231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.3■■□□□ 1
SYF2-204ENST00000476231 FZD1Q9UP38 647 aa21.3■■□□□ 1
SYF2-204ENST00000476231 PPP2R2CQ9Y2T4 447 aa21.3■■□□□ 1
SYF2-204ENST00000476231 KLRC4O43908 158 aa21.3■■□□□ 1
SYF2-204ENST00000476231 ZNF76P36508 570 aa21.3■■□□□ 1
SYF2-204ENST00000476231 HSD17B4P51659 736 aa21.3■■□□□ 1
SYF2-204ENST00000476231 GHRHRQ02643 423 aa21.3■■□□□ 1
SYF2-204ENST00000476231 HYIQ5T013 277 aa21.3■■□□□ 1
SYF2-204ENST00000476231 DPY19L2Q6NUT2 758 aa21.3■■□□□ 1
SYF2-204ENST00000476231 SV2BQ7L1I2 683 aa21.3■■□□□ 1
SYF2-204ENST00000476231 MCF2L2Q86YR7 1114 aa21.3■■□□□ 1
SYF2-204ENST00000476231 SULF1Q8IWU6 871 aa21.3■■□□□ 1
SYF2-204ENST00000476231 CCDC47Q96A33 483 aaKnown RBP21.3■■□□□ 1
SYF2-204ENST00000476231 TRIM9Q9C026 710 aa21.3■■□□□ 1
SYF2-204ENST00000476231 PARP14Q460N5 1801 aa21.29■■□□□ 1
SYF2-204ENST00000476231 ZBED4O75132 1171 aa21.29■■□□□ 1
SYF2-204ENST00000476231 USP2O75604 605 aaPredicted RBP21.29■■□□□ 1
SYF2-204ENST00000476231 SAMD3Q8N6K7 520 aa21.29■■□□□ 1
SYF2-204ENST00000476231 LARP4BQ92615 738 aaKnown RBP21.29■■□□□ 1
SYF2-204ENST00000476231 GJA10Q969M2 543 aa21.29■■□□□ 1
SYF2-204ENST00000476231 NT5C3AQ9H0P0 336 aa21.29■■□□□ 1
SYF2-204ENST00000476231 BLOC1S4Q9NUP1 217 aa21.29■■□□□ 1
SYF2-204ENST00000476231 RABGAP1Q9Y3P9 1069 aa21.29■■□□□ 1
SYF2-204ENST00000476231 CTDP1Q9Y5B0 961 aaPredicted RBP21.29■■□□□ 1
SYF2-204ENST00000476231 STK24Q9Y6E0 443 aa21.29■■□□□ 1
SYF2-204ENST00000476231 RHOBTB3O94955 611 aa21.28■■□□□ 1
SYF2-204ENST00000476231 PAK1Q13153 545 aa21.28■■□□□ 1
SYF2-204ENST00000476231 KMT5BQ4FZB7 885 aa21.28■■□□□ 1
SYF2-204ENST00000476231 HSP90AA4PQ58FG1 418 aa21.28■■□□□ 1
SYF2-204ENST00000476231 KLHL10Q6JEL2 608 aa21.28■■□□□ 1
SYF2-204ENST00000476231 PPFIBP1Q86W92 1011 aa21.28■■□□□ 1
SYF2-204ENST00000476231 SMYD4Q8IYR2 804 aaPredicted RBP21.28■■□□□ 1
SYF2-204ENST00000476231 NUDT12Q9BQG2 462 aa21.28■■□□□ 1
SYF2-204ENST00000476231 LRRC27Q9C0I9 530 aa21.28■■□□□ 1
SYF2-204ENST00000476231 MAP3K20Q9NYL2 800 aaKnown RBP21.28■■□□□ 1
SYF2-204ENST00000476231 FECHP22830 423 aa21.28■■□□□ 1
SYF2-204ENST00000476231 ANKRD20A12PQ8NF67 263 aa21.28■■□□□ 1
SYF2-204ENST00000476231 CLEC4DQ8WXI8 215 aa21.28■■□□□ 1
SYF2-204ENST00000476231 RAD54LQ92698 747 aa21.28■■□□□ 1
SYF2-204ENST00000476231 L3MBTL3Q96JM7 780 aaPredicted RBP21.28■■□□□ 1
SYF2-204ENST00000476231 CCT6AP40227 531 aaKnown RBP21.27■■□□□ 1
SYF2-204ENST00000476231 STX17P56962 302 aa21.27■■□□□ 1
SYF2-204ENST00000476231 CPXCR1Q8N123 301 aa21.27■■□□□ 1
SYF2-204ENST00000476231 RAVER2Q9HCJ3 691 aaKnown RBP21.27■■□□□ 1
SYF2-204ENST00000476231 CTNND2Q9UQB3 1225 aa21.27■■□□□ 1
SYF2-204ENST00000476231 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.27■■□□□ 11e-6■■■□□ 16.5
SYF2-204ENST00000476231 IGLV3-22A0A075B6J6 115 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 MSH4O15457 936 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 TEX33O43247 280 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 HMGCS2P54868 508 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 MAP3K9P80192 1104 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 SPIRE1Q08AE8 756 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 TRIM14Q14142 442 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 HAUS3Q68CZ6 603 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 USP50Q70EL3 339 aaPredicted RBP21.27■□□□□ 0.99
SYF2-204ENST00000476231 CNGA4Q8IV77 575 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 ZNF397Q8NF99 534 aaPredicted RBP21.27■□□□□ 0.99
SYF2-204ENST00000476231 AFG3L2Q9Y4W6 797 aa21.27■□□□□ 0.99
SYF2-204ENST00000476231 RBBP6Q7Z6E9 1792 aaKnown RBP21.26■□□□□ 0.99
SYF2-204ENST00000476231 VWA5AO00534 786 aa21.26■□□□□ 0.99
SYF2-204ENST00000476231 ALAS1P13196 640 aa21.26■□□□□ 0.99
SYF2-204ENST00000476231 ADKP55263 362 aaKnown RBP21.26■□□□□ 0.99
SYF2-204ENST00000476231 ASIC1P78348 528 aa21.26■□□□□ 0.99
SYF2-204ENST00000476231 MCM6Q14566 821 aa21.26■□□□□ 0.99
SYF2-204ENST00000476231 GIMAP8Q8ND71 665 aaPredicted RBP21.26■□□□□ 0.99
SYF2-204ENST00000476231 ERMNQ8TAM6 284 aa21.26■□□□□ 0.99
SYF2-204ENST00000476231 TMOD4Q9NZQ9 345 aa21.26■□□□□ 0.99
SYF2-204ENST00000476231 PPP1R12BO60237 982 aaPredicted RBP21.25■□□□□ 0.99
SYF2-204ENST00000476231 GOLGA8FQ08AF8 430 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 GOLGA8DPQ0D2H9 430 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 CNNM4Q6P4Q7 775 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 ADSSL1Q8N142 457 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 DNAI1Q9UI46 699 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 PAPPA2Q9BXP8 1791 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 ADM5C9JUS6 153 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 NFIBO00712 420 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 TPM1P09493 284 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 PPP1R2P41236 205 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 PRKG1Q13976 671 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 ECM1Q16610 540 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 SH3D19Q5HYK7 790 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.25■□□□□ 0.99
SYF2-204ENST00000476231 CYP2W1Q8TAV3 490 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 RBM46Q8TBY0 533 aaKnown RBP21.25■□□□□ 0.99
SYF2-204ENST00000476231 ZC3H15Q8WU90 426 aaKnown RBP21.25■□□□□ 0.99
SYF2-204ENST00000476231 NELFBQ8WX92 580 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 ATG4CQ96DT6 458 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 EXOC1Q9NV70 894 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 GDAQ9Y2T3 454 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 SNCAIPQ9Y6H5 919 aa21.25■□□□□ 0.99
SYF2-204ENST00000476231 ZC3H4Q9UPT8 1303 aaKnown RBP21.25■□□□□ 0.99
SYF2-204ENST00000476231 DSG3P32926 999 aa21.24■□□□□ 0.99
SYF2-204ENST00000476231 PRCPP42785 496 aa21.24■□□□□ 0.99
SYF2-204ENST00000476231 OAZ1P54368 228 aa21.24■□□□□ 0.99
SYF2-204ENST00000476231 STIM1Q13586 685 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms