RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 HOXA13P31271 388 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-210ENST00000474684 GHRHRQ02643 423 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 ARHGAP1Q07960 439 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 PPIGQ13427 754 aaKnown RBP eCLIP6.9□□□□□ -1.32e-7■□□□□ 11.1
CPSF7-210ENST00000474684 GRM4Q14833 912 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 GRIN2CQ14957 1233 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 ZNF787Q6DD87 383 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 IQSEC1Q6DN90 963 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 CCDC62Q6P9F0 684 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 SEPT14Q6ZU15 432 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 FBXO11Q86XK2 927 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 HOMER1Q86YM7 354 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 RAB11FIP4Q86YS3 637 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 MB21D2Q8IYB1 491 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-210ENST00000474684 DNERQ8NFT8 737 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 MAFAQ8NHW3 353 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-210ENST00000474684 SCFD2Q8WU76 684 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 AFG1LQ8WV93 481 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 GPKOWQ92917 476 aaPredicted RBP eCLIP6.9□□□□□ -1.3
CPSF7-210ENST00000474684 MTMR8Q96EF0 704 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 CTAGE1Q96RT6 745 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 PIGSQ96S52 555 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 MYL10Q9BUA6 226 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 ADAM33Q9BZ11 813 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 KRT23Q9C075 422 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 IL23AQ9NPF7 189 aa6.9□□□□□ -1.3
CPSF7-210ENST00000474684 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
CPSF7-210ENST00000474684 RBM8AQ9Y5S9 174 aaKnown RBP6.9□□□□□ -1.3
CPSF7-210ENST00000474684 LOC102724159A0A0B4J2E5 919 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 PALM3A6NDB9 673 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 KLRF2D3W0D1 207 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 DLL1O00548 723 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 CABYRO75952 493 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 CFBP00751 764 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 ZNF286BP0CG31 522 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 MYOGP15173 224 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 FOSL2P15408 326 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 RXRAP19793 462 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 CPT1AP50416 773 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 HSD17B4P51659 736 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 TROAPQ12815 778 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 TTLL4Q14679 1199 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 PWP2Q15269 919 aaKnown RBP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 LY6KQ17RY6 165 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 TCTN1Q2MV58 587 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 NBPF20Q3BBV1 942 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 FAM47CQ5HY64 1035 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 PSRC1Q6PGN9 363 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 OTOP2Q7RTS6 562 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 SPRED2Q7Z698 418 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 TMEM199Q8N511 208 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 PIBF1Q8WXW3 757 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 DHX38Q92620 1227 aaKnown RBP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 KAT2BQ92831 832 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 WNT8BQ93098 351 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 TIFAQ96CG3 184 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 RMDN3Q96TC7 470 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 MTG1Q9BT17 334 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 PRDM6Q9NQX0 595 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 PXMP2Q9NR77 195 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 POLR3EQ9NVU0 708 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 CTNNA3Q9UI47 895 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 Q9Y3F1 56 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 TELO2Q9Y4R8 837 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 V9GY48 417 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-210ENST00000474684 COL4A6Q14031 1691 aa6.89□□□□□ -1.31
CPSF7-210ENST00000474684 TTC3P53804 2025 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 FNDC1Q4ZHG4 1894 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 PLXNA4Q9HCM2 1894 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 FRMPD4Q14CM0 1322 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 TMEM265A0A087WTH1 108 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 A6NJR5 290 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 IFIT3O14879 490 aaKnown RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 ZBTB5O15062 677 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 ZEB2O60315 1214 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 PLEKHA8P1O95397 391 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 UBA1P22314 1058 aaKnown RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 RABGGTBP53611 331 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 ADGRE1Q14246 886 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 HIC1Q14526 733 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 CCDC178Q5BJE1 867 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 GDF6Q6KF10 455 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 DEFB128Q7Z7B8 93 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 RGS22Q8NE09 1264 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 HERVK_113Q902F9 699 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 ZFRQ96KR1 1074 aaKnown RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 PDCD2LQ9BRP1 358 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 AMNQ9BXJ7 453 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 COL25A1Q9BXS0 654 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 LRRC2Q9BYS8 371 aa6.88□□□□□ -1.31
CPSF7-210ENST00000474684 LSG1Q9H089 658 aaKnown RBP6.88□□□□□ -1.31
CPSF7-210ENST00000474684 NKX2-4Q9H2Z4 354 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms