RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 RNF207Q6ZRF8 634 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 NCAPG2Q86XI2 1143 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 C4orf32Q8N8J7 132 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 SYTL5Q8TDW5 730 aaPredicted RBP23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 CRYGNQ8WXF5 182 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 CCDC102AQ96A19 550 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 TAAR1Q96RJ0 339 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 UIMC1Q96RL1 719 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 XPO4Q9C0E2 1151 aaKnown RBP23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 TMEM60Q9H2L4 133 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 RABGAP1Q9Y3P9 1069 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 ERCC3P19447 782 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 APLP1P51693 650 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 ERVK-9P63128 1117 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 ERVK-24P63145 666 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 MCF2L2Q86YR7 1114 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 PPP1R13BQ96KQ4 1090 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 ACAD9Q9H845 621 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 A1CFQ9NQ94 594 aaKnown RBP23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 CBFA2T2O43439 604 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 SLC37A4O43826 429 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 AOC2O75106 756 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 SMC2O95347 1197 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 DPCR1Q3MIW9 517 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 E4F1Q66K89 784 aaPredicted RBP23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 TMC6Q7Z403 805 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 HHIPL1Q96JK4 782 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 PORCNQ9H237 461 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 IFNKQ9P0W0 207 aa23.34■■□□□ 1.33
SMIM11A-204ENST00000474455 ARHGAP4P98171 946 aa23.33■■□□□ 1.33
SMIM11A-204ENST00000474455 GHRHRQ02643 423 aa23.33■■□□□ 1.33
SMIM11A-204ENST00000474455 ZNF771Q7L3S4 317 aaPredicted RBP23.33■■□□□ 1.33
SMIM11A-204ENST00000474455 IFNL1Q8IU54 200 aa23.33■■□□□ 1.33
SMIM11A-204ENST00000474455 ZNF202O95125 648 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 FOSP01100 380 aaPredicted RBP23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 IL17AQ16552 155 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 DEFB115Q30KQ5 88 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 SPECC1Q5M775 1068 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 AXDND1Q5T1B0 1012 aaPredicted RBP23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 ARMCX5Q6P1M9 558 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 POTEDQ86YR6 584 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 CYP2W1Q8TAV3 490 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 GJA10Q969M2 543 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 EFCC1Q9HA90 598 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 CREBZFQ9NS37 354 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 CYP39A1Q9NYL5 469 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 PNMA2Q9UL42 364 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 KIAA1217Q5T5P2 1943 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 ECM2O94769 699 aaPredicted RBP23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 SREBF1P36956 1147 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 NCAPHQ15003 741 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 TKFCQ3LXA3 575 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 IL31RAQ8NI17 732 aa23.32■■□□□ 1.32
SMIM11A-204ENST00000474455 MCM3APO60318 1980 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 PHLPP2Q6ZVD8 1323 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 SLFN14P0C7P3 912 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 ATP2C1P98194 919 aaPredicted RBP23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 FBXO38Q6PIJ6 1188 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 CHST13Q8NET6 341 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 CPA4Q9UI42 421 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 FBXO2Q9UK22 296 aaPredicted RBP23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 PLXNB2O15031 1838 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 CENPFP49454 3210 aa23.31■■□□□ 1.32
SMIM11A-204ENST00000474455 PPP6R2O75170 966 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 ELF2Q15723 593 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 JMYQ8N9B5 988 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 PARK7Q99497 189 aaKnown RBP23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 TUBE1Q9UJT0 475 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 A0A087WWV3 80 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 FAM237AA0A1B0GTK4 181 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 RASSF10A6NK89 507 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 FAM86B1E9PN63 330 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 FAM86B2P0C5J1 330 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 H2AFXP16104 143 aaPredicted RBP23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 EIF2AK2P19525 551 aaKnown RBP23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 CNTN2Q02246 1040 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 BMS1Q14692 1282 aaKnown RBP23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 TAF1CQ15572 869 aaPredicted RBP23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 WDR78Q5VTH9 848 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 ANKRD35Q8N283 1001 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 GPRC5AQ8NFJ5 357 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 CAPNS2Q96L46 248 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 SRRTQ9BXP5 876 aaKnown RBP23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 CEP131Q9UPN4 1083 aa23.3■■□□□ 1.32
SMIM11A-204ENST00000474455 PTPREP23469 700 aa23.29■■□□□ 1.32
SMIM11A-204ENST00000474455 USP11P51784 963 aa23.29■■□□□ 1.32
SMIM11A-204ENST00000474455 FANCCQ00597 558 aa23.29■■□□□ 1.32
SMIM11A-204ENST00000474455 PFKFB1P16118 471 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 TM4SF4P48230 202 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 TERF2Q15554 542 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 PPP4R3AQ6IN85 833 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 RMDN3Q96TC7 470 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 DDX25Q9UHL0 483 aaKnown RBP23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 PLXNA1Q9UIW2 1896 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 ASTN1O14525 1302 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 RPTORQ8N122 1335 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 GCLCP48506 637 aaPredicted RBP23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 INHBEP58166 350 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 MCTP2Q6DN12 878 aa23.28■■□□□ 1.32
SMIM11A-204ENST00000474455 SHC4Q6S5L8 630 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms