RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MGAMO43451 1857 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 PFASO15067 1338 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 POLR2DO15514 142 aaKnown RBP22.98■■□□□ 1.27
CDHR3-210ENST00000474330 ERCC3P19447 782 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 PGM5Q15124 567 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 ANKRD13CQ8N6S4 541 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 CYP2W1Q8TAV3 490 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 FAM20AQ96MK3 541 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 PDCD2LQ9BRP1 358 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 MORF4L1Q9UBU8 362 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 PTPN22Q9Y2R2 807 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 LCTP09848 1927 aa22.98■■□□□ 1.27
CDHR3-210ENST00000474330 MEIS1O00470 390 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 TXLNAP40222 546 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 GSE1Q14687 1217 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 ARHGEF16Q5VV41 709 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 XRRA1Q6P2D8 792 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 KRBA2Q6ZNG9 492 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 NIPA1Q7RTP0 329 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 ELOA2Q8IYF1 753 aaPredicted RBP22.97■■□□□ 1.27
CDHR3-210ENST00000474330 ANKRD35Q8N283 1001 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 SHCBP1Q8NEM2 672 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 GPRC5AQ8NFJ5 357 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 PURBQ96QR8 312 aaKnown RBP22.97■■□□□ 1.27
CDHR3-210ENST00000474330 MXRA8Q9BRK3 442 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 SDF4Q9BRK5 362 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 PYM1Q9BRP8 204 aaKnown RBP22.97■■□□□ 1.27
CDHR3-210ENST00000474330 MSH4O15457 936 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 EIF2AK2P19525 551 aaKnown RBP22.97■■□□□ 1.27
CDHR3-210ENST00000474330 UBA7P41226 1012 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 SETQ01105 290 aaPredicted RBP22.97■■□□□ 1.27
CDHR3-210ENST00000474330 FAM110CQ1W6H9 321 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 LONRF3Q496Y0 759 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 PLA2G4DQ86XP0 818 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 IL31RAQ8NI17 732 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 NSUN6Q8TEA1 469 aaKnown RBP22.97■■□□□ 1.27
CDHR3-210ENST00000474330 PANK2Q9BZ23 570 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 MROH8Q9H579 483 aa22.97■■□□□ 1.27
CDHR3-210ENST00000474330 ZNFX1Q9P2E3 1918 aaKnown RBP22.96■■□□□ 1.27
CDHR3-210ENST00000474330 PLXNB2O15031 1838 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 A0A087X0B3 334 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 CDC25AP30304 524 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 CCNA1P78396 465 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 LRSAM1Q6UWE0 723 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 PDILTQ8N807 584 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 LRWD1Q9UFC0 647 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 USP25Q9UHP3 1055 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 UBIAD1Q9Y5Z9 338 aa22.96■■□□□ 1.27
CDHR3-210ENST00000474330 PP2D1A8MPX8 630 aa22.95■■□□□ 1.26
CDHR3-210ENST00000474330 MRPS9P82933 396 aaKnown RBP22.95■■□□□ 1.26
CDHR3-210ENST00000474330 CNNM3Q8NE01 707 aa22.95■■□□□ 1.26
CDHR3-210ENST00000474330 DNERQ8NFT8 737 aa22.95■■□□□ 1.26
CDHR3-210ENST00000474330 ECM2O94769 699 aaPredicted RBP22.94■■□□□ 1.26
CDHR3-210ENST00000474330 ITGB5P18084 799 aa22.94■■□□□ 1.26
CDHR3-210ENST00000474330 VSIG10LQ86VR7 867 aa22.94■■□□□ 1.26
CDHR3-210ENST00000474330 GJA10Q969M2 543 aa22.94■■□□□ 1.26
CDHR3-210ENST00000474330 TRIM47Q96LD4 638 aa22.94■■□□□ 1.26
CDHR3-210ENST00000474330 SERTAD1Q9UHV2 236 aa22.94■■□□□ 1.26
CDHR3-210ENST00000474330 DOCK3Q8IZD9 2030 aa22.94■■□□□ 1.26
CDHR3-210ENST00000474330 ACTN4O43707 911 aaKnown RBP22.93■■□□□ 1.26
CDHR3-210ENST00000474330 NR3C2P08235 984 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 E2F4Q16254 413 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 KANK3Q6NY19 840 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 CABP7Q86V35 215 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 CKAP2LQ8IYA6 745 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 IQUBQ8NA54 791 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 DHX58Q96C10 678 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 ZFP91Q96JP5 570 aaPredicted RBP22.93■■□□□ 1.26
CDHR3-210ENST00000474330 JADE2Q9NQC1 790 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 CCDC39Q9UFE4 941 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 POTEMA6NI47 508 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 CCND2P30279 289 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 PSMC4P43686 418 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 KARSQ15046 597 aaKnown RBP22.93■■□□□ 1.26
CDHR3-210ENST00000474330 SLC5A5Q92911 643 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 IWS1Q96ST2 819 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 MMTAG2Q9BU76 263 aaKnown RBP22.93■■□□□ 1.26
CDHR3-210ENST00000474330 DISC1Q9NRI5 854 aa22.93■■□□□ 1.26
CDHR3-210ENST00000474330 SLFN14P0C7P3 912 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 ARP10275 920 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 MYCLP12524 364 aaPredicted RBP22.92■■□□□ 1.26
CDHR3-210ENST00000474330 SPIRE1Q08AE8 756 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 KIF22Q14807 665 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 FAM133AQ8N9E0 248 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 CCDC34Q96HJ3 373 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 FUCA2Q9BTY2 467 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 PORCNQ9H237 461 aa22.92■■□□□ 1.26
CDHR3-210ENST00000474330 POTEB2H3BUK9 544 aa22.91■■□□□ 1.26
CDHR3-210ENST00000474330 STAM2O75886 525 aa22.91■■□□□ 1.26
CDHR3-210ENST00000474330 CNTN2Q02246 1040 aa22.91■■□□□ 1.26
CDHR3-210ENST00000474330 ARHGEF6Q15052 776 aa22.91■■□□□ 1.26
CDHR3-210ENST00000474330 UIMC1Q96RL1 719 aa22.91■■□□□ 1.26
CDHR3-210ENST00000474330 ZNF577Q9BSK1 485 aa22.91■■□□□ 1.26
CDHR3-210ENST00000474330 WDR11Q9BZH6 1224 aa22.91■■□□□ 1.26
CDHR3-210ENST00000474330 HOOK1Q9UJC3 728 aaKnown RBP22.91■■□□□ 1.26
CDHR3-210ENST00000474330 TNRC18O15417 2968 aaPredicted RBP22.91■■□□□ 1.26
CDHR3-210ENST00000474330 PSMD10O75832 226 aa22.9■■□□□ 1.26
CDHR3-210ENST00000474330 MDM2Q00987 491 aaPredicted RBP22.9■■□□□ 1.26
CDHR3-210ENST00000474330 KCTD2Q14681 263 aa22.9■■□□□ 1.26
CDHR3-210ENST00000474330 WDR78Q5VTH9 848 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms