RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 KDM2BQ8NHM5 1336 aa6.72□□□□□ -1.33
CNOT4-209ENST00000473470 PPP1R11O60927 126 aaPredicted RBP6.71□□□□□ -1.34
CNOT4-209ENST00000473470 ZSCAN22P10073 491 aaPredicted RBP6.71□□□□□ -1.34
CNOT4-209ENST00000473470 LCP1P13796 627 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 AFF3P51826 1226 aaKnown RBP6.71□□□□□ -1.34
CNOT4-209ENST00000473470 IFNL3Q8IZI9 196 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 ZSWIM2Q8NEG5 633 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 DDX11Q96FC9 970 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 YIPF4Q9BSR8 244 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 FBXL7Q9UJT9 491 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 ATAD2BQ9ULI0 1458 aa6.71□□□□□ -1.34
CNOT4-209ENST00000473470 LAMC3Q9Y6N6 1575 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 CCDC163A0A0D9SF12 145 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 HGSO14964 777 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-209ENST00000473470 CYP2C8P10632 490 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 GABREP78334 506 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 CACNB2Q08289 660 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-209ENST00000473470 STEAP3Q658P3 488 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 LBX2Q6XYB7 198 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 FAM126BQ8IXS8 530 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 SP8Q8IXZ3 490 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 PANK1Q8TE04 598 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 THAP3Q8WTV1 239 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-209ENST00000473470 PTPRN2Q92932 1015 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 RXFP1Q9HBX9 757 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 PALD1Q9ULE6 856 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 PMF1-BGLAPU3KQ54 211 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 SYNJ2O15056 1496 aa6.7□□□□□ -1.34
CNOT4-209ENST00000473470 ZNF608Q9ULD9 1512 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-209ENST00000473470 DIAPH1O60610 1272 aaKnown RBP6.69□□□□□ -1.34
CNOT4-209ENST00000473470 NCKAP1LP55160 1127 aa6.69□□□□□ -1.34
CNOT4-209ENST00000473470 NTRK3Q16288 839 aa6.69□□□□□ -1.34
CNOT4-209ENST00000473470 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
CNOT4-209ENST00000473470 YOD1Q5VVQ6 348 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-209ENST00000473470 KRTAP1-3Q8IUG1 177 aa6.69□□□□□ -1.34
CNOT4-209ENST00000473470 TMEFF1Q8IYR6 380 aa6.69□□□□□ -1.34
CNOT4-209ENST00000473470 DACT3Q96B18 629 aaPredicted RBP6.69□□□□□ -1.34
CNOT4-209ENST00000473470 MRFAP1L1Q96HT8 127 aa6.69□□□□□ -1.34
CNOT4-209ENST00000473470 IRF2BPLQ9H1B7 796 aa6.69□□□□□ -1.34
CNOT4-209ENST00000473470 CHD1O14646 1710 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 FAM221BA6H8Z2 402 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 FAM47E-STBD1D6RA91 191 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 ARNTLO00327 626 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 SGSM2O43147 1006 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 LIMS1P48059 325 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 SPOCD1Q6ZMY3 1216 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 MILR1Q7Z6M3 343 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 MTDHQ86UE4 582 aaKnown RBP6.68□□□□□ -1.34
CNOT4-209ENST00000473470 PWWP2AQ96N64 755 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 MYOTQ9UBF9 498 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 MRPS23Q9Y3D9 190 aaKnown RBP6.68□□□□□ -1.34
CNOT4-209ENST00000473470 SIT1Q9Y3P8 196 aa6.68□□□□□ -1.34
CNOT4-209ENST00000473470 EFCAB14O75071 495 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 GNAT1P11488 350 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 FOXO4P98177 505 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 TRIM48Q8IWZ4 208 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 JMYQ8N9B5 988 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 TTLL11Q8NHH1 800 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 SMARCC2Q8TAQ2 1214 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.67□□□□□ -1.34
CNOT4-209ENST00000473470 EXOC2Q96KP1 924 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 WRNIP1Q96S55 665 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 DHRS4Q9BTZ2 278 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 SMOC1Q9H4F8 434 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 SLC6A20Q9NP91 592 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 DTLQ9NZJ0 730 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 SFMBT1Q9UHJ3 866 aa6.67□□□□□ -1.34
CNOT4-209ENST00000473470 CDK11AQ9UQ88 783 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-209ENST00000473470 MSCO60682 206 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 SOD2P04179 222 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 ATF2P15336 505 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 MC3RP41968 323 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 HTRA3P83110 453 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 BMS1Q14692 1282 aaKnown RBP6.66□□□□□ -1.34
CNOT4-209ENST00000473470 KCNT2Q6UVM3 1135 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 LCNL1Q6ZST4 164 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 LINC01356Q8N9X3 169 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 DNAJC7Q99615 494 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 EPB41L4AQ9HCS5 686 aaPredicted RBP6.66□□□□□ -1.34
CNOT4-209ENST00000473470 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
CNOT4-209ENST00000473470 ARID1BQ8NFD5 2236 aaPredicted RBP6.66□□□□□ -1.34
CNOT4-209ENST00000473470 TADA3O75528 432 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 C8BP07358 591 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 C6orf222P0C671 652 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-209ENST00000473470 FAM153BP0C7A2 387 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 NKX3-2P78367 333 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 PAK1Q13153 545 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 FAM209AQ5JX71 171 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 OTOP3Q7RTS5 596 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 UHMK1Q8TAS1 419 aaKnown RBP6.65□□□□□ -1.34
CNOT4-209ENST00000473470 MRPL4Q9BYD3 311 aaKnown RBP6.65□□□□□ -1.34
CNOT4-209ENST00000473470 CDIP1Q9H305 208 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 BCAS3Q9H6U6 928 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 RAPGEFL1Q9UHV5 662 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 PTCH2Q9Y6C5 1203 aa6.65□□□□□ -1.34
CNOT4-209ENST00000473470 TCRBV5S2A0A599 114 aa6.64□□□□□ -1.35
CNOT4-209ENST00000473470 BLACEA4D250 179 aa6.64□□□□□ -1.35
CNOT4-209ENST00000473470 WNT9AO14904 365 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms