RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 MEIS1O00470 390 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 ADAMTS4O75173 837 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 U2AF2P26368 475 aaKnown RBP eCLIP21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 SEMA3FQ13275 785 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 INF2Q27J81 1249 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 ANO1Q5XXA6 986 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 NEK8Q86SG6 692 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 TLK2Q86UE8 772 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 LENG1Q96BZ8 264 aaPredicted RBP21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 SENP7Q9BQF6 1050 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 SPC25Q9HBM1 224 aa21.6■■□□□ 1.05
CTDSP1-207ENST00000473420 IGLV3-22A0A075B6J6 115 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 CYP3A7-CYP3A51PA0A087WV96 503 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 POTEFA5A3E0 1075 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 FAM86B1E9PN63 330 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 EDIL3O43854 480 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 GH1P01241 217 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 TFRCP02786 760 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 FAM86B2P0C5J1 330 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 CYP3A7P24462 503 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 CST5P28325 142 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 GNL2Q13823 731 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 LY6KQ17RY6 165 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 EARS2Q5JPH6 523 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 NOSTRINQ8IVI9 506 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 ARRDC4Q8NCT1 418 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 GIMAP8Q8ND71 665 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 EMID1Q96A84 441 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 AP5M1Q9H0R1 490 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 FOXD4L1Q9NU39 408 aa21.59■■□□□ 1.05
CTDSP1-207ENST00000473420 PDIA4P13667 645 aaKnown RBP21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 GCFC2P16383 781 aaKnown RBP21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 UBA1P22314 1058 aaKnown RBP21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 NEDD9Q14511 834 aa21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 TMEM63BQ5T3F8 832 aa21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 RNF180Q86T96 592 aa21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 CYP2W1Q8TAV3 490 aa21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 MBOAT7Q96N66 472 aa21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 KCNH7Q9NS40 1196 aa21.58■■□□□ 1.05
CTDSP1-207ENST00000473420 KIF28PB7ZC32 967 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 DYNC1LI2O43237 492 aaPredicted RBP21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 PGK1P00558 417 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 SYT1P21579 422 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 SP2Q02086 613 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 LRRC41Q15345 812 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 Q4G0T1 1027 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 GJC2Q5T442 439 aaPredicted RBP21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 PPP4R3AQ6IN85 833 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 PLA2G4DQ86XP0 818 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 KLHDC9Q8NEP7 349 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 OR6J1Q8NGC5 347 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 COPS5Q92905 334 aa21.57■■□□□ 1.04
CTDSP1-207ENST00000473420 FAM205CA6NFA0 338 aa21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 DNM1LO00429 736 aa21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 C6orf222P0C671 652 aaPredicted RBP21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 KCNA2P16389 499 aa21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 ARHGAP1Q07960 439 aa21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 LAMC2Q13753 1193 aa21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 LETM2Q2VYF4 491 aa21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 CELF3Q5SZQ8 465 aaKnown RBP21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 DHX37Q8IY37 1157 aaKnown RBP21.56■■□□□ 1.04
CTDSP1-207ENST00000473420 NFASCO94856 1347 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 CTAGE5O15320 804 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 TDP2O95551 362 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 GGPS1O95749 300 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 ARP10275 920 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 EN2P19622 333 aaPredicted RBP21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 TRAPPC10P48553 1259 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 CPT1AP50416 773 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 PRR16Q569H4 304 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 MYSM1Q5VVJ2 828 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 MCTP1Q6DN14 999 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 PCSK9Q8NBP7 692 aaKnown RBP21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 LENG9Q96B70 501 aa21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 TSEN34Q9BSV6 310 aaKnown RBP21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 AGO4Q9HCK5 861 aaKnown RBP21.55■■□□□ 1.04
CTDSP1-207ENST00000473420 A6NJR5 290 aa21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 KBTBD13C9JR72 458 aa21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 ATP9AO75110 1047 aa21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 SOX10P56693 466 aa21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 ORC2Q13416 577 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 FSCN1Q16658 493 aaKnown RBP21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 BRDTQ58F21 947 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 CCSAPQ6IQ19 270 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 METTL7BQ6UX53 244 aa21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 MLXIPQ9HAP2 919 aa21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 DDX25Q9UHL0 483 aaKnown RBP21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 NOL7Q9UMY1 257 aaKnown RBP21.54■■□□□ 1.04
CTDSP1-207ENST00000473420 VPS37CA5D8V6 355 aaPredicted RBP21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 MYADML2A6NDP7 307 aa21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 MOXD2PA6NHM9 499 aa21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 STX6O43752 255 aa21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 ZEB2O60315 1214 aa21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 CCNT1O60563 726 aaKnown RBP21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 FARP2O94887 1054 aaPredicted RBP21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 PTGS1P23219 599 aa21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 MNX1P50219 401 aaPredicted RBP21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 PPTC7Q8NI37 304 aa21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 ZNF577Q9BSK1 485 aa21.53■■□□□ 1.04
CTDSP1-207ENST00000473420 BRCA2P51587 3418 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms