RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PRRX2Q99811 253 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 FSD1Q9BTV5 496 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 ALG13Q9NP73 1137 aaKnown RBP8.08□□□□□ -1.12
HDAC1-204ENST00000471488 ECHDC1Q9NTX5 307 aa8.08□□□□□ -1.12
HDAC1-204ENST00000471488 C5orf42Q9H799 3197 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 C17orf102A2RUQ5 167 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 NCK2O43639 380 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 PLA2G6O60733 806 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 TBX10O75333 385 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 ZFYP08048 801 aaPredicted RBP8.07□□□□□ -1.12
HDAC1-204ENST00000471488 GOLGA8HP0CJ92 632 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 LTBRP36941 435 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 VCPP55072 806 aaKnown RBP8.07□□□□□ -1.12
HDAC1-204ENST00000471488 HTRA4P83105 476 aaPredicted RBP8.07□□□□□ -1.12
HDAC1-204ENST00000471488 ZXDAP98168 799 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 SESTD1Q86VW0 696 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 DNERQ8NFT8 737 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 CLEC4DQ8WXI8 215 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 ZFP91Q96JP5 570 aaPredicted RBP8.07□□□□□ -1.12
HDAC1-204ENST00000471488 TAAR1Q96RJ0 339 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 C11orf84Q9BUA3 381 aaPredicted RBP8.07□□□□□ -1.12
HDAC1-204ENST00000471488 UBA5Q9GZZ9 404 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 CPVLQ9H3G5 476 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 PLIN4Q96Q06 1357 aa8.07□□□□□ -1.12
HDAC1-204ENST00000471488 LOC102724159A0A0B4J2E5 919 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 PPFIA3O75145 1194 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 EDNRBP24530 442 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 NRIP1P48552 1158 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 FOXK2Q01167 660 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 LAMC2Q13753 1193 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 BTG3Q14201 252 aaPredicted RBP8.06□□□□□ -1.12
HDAC1-204ENST00000471488 PWP2Q15269 919 aaKnown RBP8.06□□□□□ -1.12
HDAC1-204ENST00000471488 TRIM71Q2Q1W2 868 aaKnown RBP8.06□□□□□ -1.12
HDAC1-204ENST00000471488 SIRT2Q8IXJ6 389 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 SP7Q8TDD2 431 aaPredicted RBP8.06□□□□□ -1.12
HDAC1-204ENST00000471488 MICAL1Q8TDZ2 1067 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 NSUN6Q8TEA1 469 aaKnown RBP8.06□□□□□ -1.12
HDAC1-204ENST00000471488 TBC1D5Q92609 795 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 TOP1MTQ969P6 601 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 PPP2R3CQ969Q6 453 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 SPATA33Q96N06 139 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 RMDN3Q96TC7 470 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 TMEM47Q9BQJ4 181 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 APOL5Q9BWW9 433 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 TSHZ2Q9NRE2 1034 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 BARX2Q9UMQ3 279 aaPredicted RBP8.06□□□□□ -1.12
HDAC1-204ENST00000471488 USP34Q70CQ2 3546 aa8.06□□□□□ -1.12
HDAC1-204ENST00000471488 NOP56O00567 594 aaKnown RBP8.05□□□□□ -1.12
HDAC1-204ENST00000471488 GGPS1O95749 300 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 CFBP00751 764 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 TOP1P11387 765 aaKnown RBP8.05□□□□□ -1.12
HDAC1-204ENST00000471488 BMPR1AP36894 532 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 HNRNPUQ00839 825 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC1-204ENST00000471488 SP4Q02446 784 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 RBL2Q08999 1139 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 HIC1Q14526 733 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 PKN1Q16512 942 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 PAN2Q504Q3 1202 aaKnown RBP8.05□□□□□ -1.12
HDAC1-204ENST00000471488 PLEKHG4Q58EX7 1191 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 SPOUT1Q5T280 376 aaKnown RBP8.05□□□□□ -1.12
HDAC1-204ENST00000471488 CCDC62Q6P9F0 684 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 TRAF7Q6Q0C0 670 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 PPTC7Q8NI37 304 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 MLXIPQ9HAP2 919 aa8.05□□□□□ -1.12
HDAC1-204ENST00000471488 NLRC5Q86WI3 1866 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 MICAL3Q7RTP6 2002 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.04□□□□□ -1.12
HDAC1-204ENST00000471488 TREHO43280 583 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 F2P00734 622 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 PDGFBP01127 241 aaPredicted RBP8.04□□□□□ -1.12
HDAC1-204ENST00000471488 SMIM10L2AP0DMW4 78 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 SMIM10L2BP0DMW5 78 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 GHRP10912 638 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 AVPR2P30518 371 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 ID4P47928 161 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 RRP1P56182 461 aaKnown RBP8.04□□□□□ -1.12
HDAC1-204ENST00000471488 HAND2P61296 217 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 SIGLEC14Q08ET2 396 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 UTP14CQ5TAP6 766 aaKnown RBP8.04□□□□□ -1.12
HDAC1-204ENST00000471488 ASCL5Q7RTU5 278 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 ADGRD2Q7Z7M1 963 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 SERINC5Q86VE9 423 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 MIER1Q8N108 512 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 ZKSCAN3Q9BRR0 538 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 IRF2BPLQ9H1B7 796 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 SETD4Q9NVD3 440 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 COL20A1Q9P218 1284 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 DDX41Q9UJV9 622 aaKnown RBP8.04□□□□□ -1.12
HDAC1-204ENST00000471488 PNMA2Q9UL42 364 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 DDX19BQ9UMR2 479 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 TRPC6Q9Y210 931 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC1-204ENST00000471488 RWDD3Q9Y3V2 267 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 USP15Q9Y4E8 981 aaPredicted RBP8.04□□□□□ -1.12
HDAC1-204ENST00000471488 CFAP54Q96N23 3096 aa8.04□□□□□ -1.12
HDAC1-204ENST00000471488 TRIOO75962 3097 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms