RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ABHD14A-ACY1A0A1B0GW23 586 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 LCHNA4D1U4 455 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 NBNO60934 754 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 EFCAB14O75071 495 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 EIF3JO75822 258 aaKnown RBP10.52□□□□□ -0.73
SF3A1-206ENST00000471037 GJB5O95377 273 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 CKBP12277 381 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 HSPA4P34932 840 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 PSEN2P49810 448 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 CHMP4BP1P59074 171 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 ANAPC15P60006 121 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 DEFB103AP81534 67 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 PTK7Q13308 1070 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 LAMC2Q13753 1193 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 NECTIN1Q15223 517 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 TRAF7Q6Q0C0 670 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 CHST3Q7LGC8 479 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 C7orf31Q8N865 590 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 ENAHQ8N8S7 591 aaPredicted RBP10.52□□□□□ -0.73
SF3A1-206ENST00000471037 PPTC7Q8NI37 304 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 JMJD4Q9H9V9 463 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 PXMP2Q9NR77 195 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 HDAC6Q9UBN7 1215 aa10.52□□□□□ -0.73
SF3A1-206ENST00000471037 TCF20Q9UGU0 1960 aaKnown RBP10.52□□□□□ -0.73
SF3A1-206ENST00000471037 OPLAHO14841 1288 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 NR3C2P08235 984 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 PARP1P09874 1014 aaKnown RBP10.51□□□□□ -0.73
SF3A1-206ENST00000471037 EIF2AK2P19525 551 aaKnown RBP10.51□□□□□ -0.73
SF3A1-206ENST00000471037 HSD17B4P51659 736 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 ERVK-21P61565 698 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 MFSD10Q14728 455 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 KIAA0753Q2KHM9 967 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 TCTN1Q2MV58 587 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 TRIM71Q2Q1W2 868 aaKnown RBP10.51□□□□□ -0.73
SF3A1-206ENST00000471037 ARHGEF16Q5VV41 709 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 KCNB2Q92953 911 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 TGS1Q96RS0 853 aaKnown RBP10.51□□□□□ -0.73
SF3A1-206ENST00000471037 RAD9AQ99638 391 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 AMNQ9BXJ7 453 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 TSHZ2Q9NRE2 1034 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 MAP3K20Q9NYL2 800 aaKnown RBP10.51□□□□□ -0.73
SF3A1-206ENST00000471037 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-206ENST00000471037 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
SF3A1-206ENST00000471037 TRIP12Q14669 1992 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-206ENST00000471037 LINC01553A4QN01 128 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 B4E1Z4 1266 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 SLC27A2O14975 620 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 PPFIA4O75335 1185 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 RGS20O76081 388 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 CFBP00751 764 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 ZNF286BP0CG31 522 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-206ENST00000471037 IKBKEQ14164 716 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 MBTPS1Q14703 1052 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 IMMTQ16891 758 aaKnown RBP10.5□□□□□ -0.73
SF3A1-206ENST00000471037 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 CREB3L3Q68CJ9 461 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 KCNV1Q6PIU1 500 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 STOX1Q6ZVD7 989 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 TMCO2Q7Z6W1 182 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-206ENST00000471037 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
SF3A1-206ENST00000471037 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 GDPD5Q8WTR4 605 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 WNT8BQ93098 351 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 FAM122AQ96E09 287 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 MTMR8Q96EF0 704 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 IL17RAQ96F46 866 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 PDCD2LQ9BRP1 358 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 ALG1Q9BT22 464 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 SUGCTQ9HAC7 445 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 ZSWIM5Q9P217 1185 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 EMSYQ7Z589 1322 aa10.5□□□□□ -0.73
SF3A1-206ENST00000471037 DHX16O60231 1041 aaKnown RBP10.49□□□□□ -0.73
SF3A1-206ENST00000471037 LGR5O75473 907 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 HOXC8P31273 242 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 KRT32Q14532 448 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 TSGA10IPQ3SY00 556 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 ZNF618Q5T7W0 954 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 SERINC5Q86VE9 423 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 VSIG10LQ86VR7 867 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 STAG2Q8N3U4 1231 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 LRFN3Q9BTN0 628 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 KRT23Q9C075 422 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 EPHX3Q9H6B9 360 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 COL4A6Q14031 1691 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 SIP14410 1827 aa10.49□□□□□ -0.73
SF3A1-206ENST00000471037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 ZBTB5O15062 677 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 PPP1R11O60927 126 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 CYP21A2P08686 494 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 TGFB3P10600 412 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 UBA1P22314 1058 aaKnown RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 HTRA4P83105 476 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-206ENST00000471037 HIC1Q14526 733 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 PGM5Q15124 567 aa10.48□□□□□ -0.73
SF3A1-206ENST00000471037 SEC23AQ15436 765 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms