RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 SP2Q02086 613 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 TNFAIP2Q03169 654 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 MTMR1Q13613 665 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 LY6KQ17RY6 165 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 Q4G0T1 1027 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 DUSP28Q4G0W2 176 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 PRR16Q569H4 304 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 GJC2Q5T442 439 aaPredicted RBP12□□□□□ -0.49
SMC1A-206ENST00000470241 ANO1Q5XXA6 986 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 LHX8Q68G74 356 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 PPP4R3AQ6IN85 833 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 MOXD1Q6UVY6 613 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 PLA2G4DQ86XP0 818 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 COPS5Q92905 334 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 RNF208Q9H0X6 261 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 KCNH7Q9NS40 1196 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 GNEQ9Y223 722 aaKnown RBP12□□□□□ -0.49
SMC1A-206ENST00000470241 HTTP42858 3142 aa12□□□□□ -0.49
SMC1A-206ENST00000470241 MAFGO15525 162 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 SLC37A4O43826 429 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 CCNT1O60563 726 aaKnown RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 DUSP11O75319 330 aaKnown RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 TGFB3P10600 412 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 GCFC2P16383 781 aaKnown RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 KCNA2P16389 499 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 ATP2B1P20020 1258 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 UBA1P22314 1058 aaKnown RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 TRAPPC10P48553 1259 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 KCNV1Q6PIU1 500 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 BRAPQ7Z569 592 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 CDHR1Q96JP9 859 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 DEFB118Q96PH6 123 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 BCAS3Q9H6U6 928 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 AGO4Q9HCK5 861 aaKnown RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 NOL7Q9UMY1 257 aaKnown RBP11.99□□□□□ -0.49
SMC1A-206ENST00000470241 ZDHHC9Q9Y397 364 aa11.99□□□□□ -0.49
SMC1A-206ENST00000470241 NKRFO15226 690 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMC1A-206ENST00000470241 MSH4O15457 936 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 MSCO60682 206 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 BRD1O95696 1058 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 GJB1P08034 283 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 RARBP10826 455 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 IRX5P78411 483 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-206ENST00000470241 SETQ01105 290 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-206ENST00000470241 ARHGAP1Q07960 439 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 ITGB3BPQ13352 177 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-206ENST00000470241 NBR1Q14596 966 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 ZNF174Q15697 407 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 TTC38Q5R3I4 469 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 FOXD4L5Q5VV16 416 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-206ENST00000470241 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 FAM173BQ6P4H8 233 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 POTEDQ86YR6 584 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 FOXD4L4Q8WXT5 416 aaPredicted RBP11.98□□□□□ -0.49
SMC1A-206ENST00000470241 ABHD8Q96I13 439 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 UIMC1Q96RL1 719 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 NAP1L4Q99733 375 aaKnown RBP11.98□□□□□ -0.49
SMC1A-206ENST00000470241 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 KCNMB3Q9NPA1 279 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 PKD2L1Q9P0L9 805 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 Q9Y3F1 56 aa11.98□□□□□ -0.49
SMC1A-206ENST00000470241 SYNRGQ9UMZ2 1314 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 MYADML2A6NDP7 307 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 CTAGE5O15320 804 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 DYNC1LI2O43237 492 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-206ENST00000470241 ADAMTS4O75173 837 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 GGPS1O95749 300 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 F13A1P00488 732 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 PGK1P00558 417 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 GH1P01241 217 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 MCM7P33993 719 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 GJA9P57773 515 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 NKX3-2P78367 333 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 NEDD9Q14511 834 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 RILPL1Q5EBL4 403 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 CELF3Q5SZQ8 465 aaKnown RBP11.97□□□□□ -0.49
SMC1A-206ENST00000470241 TLK2Q86UE8 772 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 OR6J1Q8NGC5 347 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 ETNPPLQ8TBG4 499 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 U2AF1L4Q8WU68 220 aaKnown RBP11.97□□□□□ -0.49
SMC1A-206ENST00000470241 SLC5A5Q92911 643 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 GJA10Q969M2 543 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 EMID1Q96A84 441 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-206ENST00000470241 ZNF577Q9BSK1 485 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 UPF3AQ9H1J1 476 aaKnown RBP11.97□□□□□ -0.49
SMC1A-206ENST00000470241 ZSCAN16Q9H4T2 348 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-206ENST00000470241 XPNPEP3Q9NQH7 507 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-206ENST00000470241 OGDHLQ9ULD0 1010 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 TELO2Q9Y4R8 837 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 PCDHB6Q9Y5E3 794 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 MCM3APO60318 1980 aa11.97□□□□□ -0.49
SMC1A-206ENST00000470241 NFASCO94856 1347 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 IPO5O00410 1097 aaKnown RBP11.96□□□□□ -0.49
SMC1A-206ENST00000470241 DHX15O43143 795 aaKnown RBP11.96□□□□□ -0.49
SMC1A-206ENST00000470241 SORBS3O60504 671 aa11.96□□□□□ -0.49
SMC1A-206ENST00000470241 FARP2O94887 1054 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms