RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 ANKRD13AQ8IZ07 590 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 FLAD1Q8NFF5 587 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 ABHD4Q8TB40 342 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 OAS3Q9Y6K5 1087 aaKnown RBP5.81□□□□□ -1.48
VPS8-220ENST00000469713 TRAF5O00463 557 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 GSTA4O15217 222 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 GLI4P10075 376 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 IGBP1P78318 339 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 RBM10P98175 930 aaKnown RBP5.8□□□□□ -1.48
VPS8-220ENST00000469713 NFKB2Q00653 900 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 SNX17Q15036 470 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 MROH9Q5TGP6 573 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 WWC2Q6AWC2 1192 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 DDX46Q7L014 1031 aaKnown RBP5.8□□□□□ -1.48
VPS8-220ENST00000469713 OTOP3Q7RTS5 596 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 AFAP1L2Q8N4X5 818 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 PIP4K2CQ8TBX8 421 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS8-220ENST00000469713 GOLGA2P5Q9HBQ8 144 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 RXFP1Q9HBX9 757 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 CRTAC1Q9NQ79 661 aa5.8□□□□□ -1.48
VPS8-220ENST00000469713 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 TCRBV5S4A2TA0A5A2 114 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 ZNF891A8MT65 544 aaPredicted RBP5.79□□□□□ -1.48
VPS8-220ENST00000469713 ZNF561-AS1K7EIQ3 104 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 NKRFO15226 690 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS8-220ENST00000469713 DGKIO75912 1065 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 PDE6AP16499 860 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 KRT15P19012 456 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 SDHBP21912 280 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 AFMP43652 599 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 MECP2P51608 486 aaKnown RBP5.79□□□□□ -1.48
VPS8-220ENST00000469713 JAM2P57087 298 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 ANAPC15P60006 121 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 SPIRE1Q08AE8 756 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 STRN3Q13033 797 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 CRY1Q16526 586 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 HABP4Q5JVS0 413 aaKnown RBP5.79□□□□□ -1.48
VPS8-220ENST00000469713 CABP7Q86V35 215 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 OSTM1Q86WC4 334 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 ANKLE2Q86XL3 938 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 RPUSD2Q8IZ73 545 aaKnown RBP5.79□□□□□ -1.48
VPS8-220ENST00000469713 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 CHST14Q8NCH0 376 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 KIRREL1Q96J84 757 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 ORAI3Q9BRQ5 295 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 TNFRSF12AQ9NP84 129 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 ATP8A1Q9Y2Q0 1164 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 YBX2Q9Y2T7 364 aaKnown RBP5.79□□□□□ -1.48
VPS8-220ENST00000469713 SIT1Q9Y3P8 196 aa5.79□□□□□ -1.48
VPS8-220ENST00000469713 KCNK3O14649 394 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 AMY2AP04746 511 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 DBHP09172 617 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 AMY2BP19961 511 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 ARL4AP40617 200 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 CDKN1CP49918 316 aaPredicted RBP5.78□□□□□ -1.48
VPS8-220ENST00000469713 LACTBP83111 547 aaPredicted RBP5.78□□□□□ -1.48
VPS8-220ENST00000469713 DHCR24Q15392 516 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 GPR19Q15760 415 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 ARHGAP36Q6ZRI8 547 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 CBLL1Q75N03 491 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 DDX42Q86XP3 938 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS8-220ENST00000469713 C2orf69Q8N8R5 385 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 OR2W6PQ8NHA6 318 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 PANK1Q8TE04 598 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 SH3RF2Q8TEC5 729 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS8-220ENST00000469713 SMURF1Q9HCE7 757 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 CABP5Q9NP86 173 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 SLC6A20Q9NP91 592 aa5.78□□□□□ -1.48
VPS8-220ENST00000469713 ZC3H12DA2A288 527 aaKnown RBP5.77□□□□□ -1.49
VPS8-220ENST00000469713 PTPDC1A2A3K4 754 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 BTBD11A6QL63 1104 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 SRGAP3O43295 1099 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 EYA4O95677 639 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 F2P00734 622 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 SLC6A11P48066 632 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 SCNN1BP51168 640 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 EVA1CP58658 441 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 ERVFRD-1P60508 538 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 DSG1Q02413 1049 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 EMC4Q5J8M3 183 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 STEAP3Q658P3 488 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 FSTL4Q6MZW2 842 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 PTRH1Q86Y79 214 aaKnown RBP5.77□□□□□ -1.49
VPS8-220ENST00000469713 KIF18BQ86Y91 864 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 DCP2Q8IU60 420 aaKnown RBP5.77□□□□□ -1.49
VPS8-220ENST00000469713 PRPF38AQ8NAV1 312 aaKnown RBP5.77□□□□□ -1.49
VPS8-220ENST00000469713 NETO2Q8NC67 525 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 ATL2Q8NHH9 583 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 CD244Q9BZW8 370 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 B4GALT6Q9UBX8 382 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 DSEQ9UL01 958 aa5.77□□□□□ -1.49
VPS8-220ENST00000469713 NUDT19A8MXV4 375 aa5.76□□□□□ -1.49
VPS8-220ENST00000469713 KRIT1O00522 736 aa5.76□□□□□ -1.49
VPS8-220ENST00000469713 MAN2B1O00754 1011 aa5.76□□□□□ -1.49
VPS8-220ENST00000469713 SLC27A2O14975 620 aa5.76□□□□□ -1.49
VPS8-220ENST00000469713 SGSM2O43147 1006 aa5.76□□□□□ -1.49
VPS8-220ENST00000469713 KRT37O76014 449 aa5.76□□□□□ -1.49
VPS8-220ENST00000469713 CYBBP04839 570 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms