RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 POLR2FP61218 127 aaKnown RBP16.48■□□□□ 0.23
LIMS2-213ENST00000469300 MYL7Q01449 175 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 LY9Q9HBG7 655 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 ASIC3Q9UHC3 531 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 PCDHA6Q9UN73 950 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 PCDHA8Q9Y5H6 950 aa16.48■□□□□ 0.23
LIMS2-213ENST00000469300 SORBS3O60504 671 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 KRT76Q01546 638 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 ENOX1Q8TC92 643 aaKnown RBP16.47■□□□□ 0.23
LIMS2-213ENST00000469300 TCP11Q8WWU5 503 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 TRIM11Q96F44 468 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 RMDN3Q96TC7 470 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
LIMS2-213ENST00000469300 SPATA24Q86W54 205 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 MED10Q9BTT4 135 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 PARP2Q9UGN5 583 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 SPP2Q13103 211 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 ANKS4BQ8N8V4 417 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 LARGE1O95461 756 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
LIMS2-213ENST00000469300 LRRC63Q05C16 580 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 SLFN12LQ6IEE8 588 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
LIMS2-213ENST00000469300 RSRC1Q96IZ7 334 aaKnown RBP16.47■□□□□ 0.23
LIMS2-213ENST00000469300 NKIRAS1Q9NYS0 192 aa16.47■□□□□ 0.23
LIMS2-213ENST00000469300 PTPREP23469 700 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 PIK3CAP42336 1068 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 KIF11P52732 1056 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 ADKP55263 362 aaKnown RBP16.46■□□□□ 0.23
LIMS2-213ENST00000469300 PAK2Q13177 524 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 RWDD2AQ9UIY3 292 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 A0A087WWV3 80 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 CAPN9O14815 690 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 PLCG1P19174 1290 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 LMNB1P20700 586 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 CHRNA5P30532 468 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 SND1Q7KZF4 910 aaKnown RBP eCLIP16.46■□□□□ 0.23
LIMS2-213ENST00000469300 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 ATRIPQ8WXE1 791 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 RAB17Q9H0T7 212 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 NSFP46459 744 aaKnown RBP16.46■□□□□ 0.23
LIMS2-213ENST00000469300 SEMA3FQ13275 785 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 LGSNQ5TDP6 509 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 DAAM2Q86T65 1068 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 UBLCP1Q8WVY7 318 aaPredicted RBP16.46■□□□□ 0.23
LIMS2-213ENST00000469300 HAUS1Q96CS2 278 aa16.46■□□□□ 0.23
LIMS2-213ENST00000469300 MST1RQ04912 1400 aa16.46■□□□□ 0.22
LIMS2-213ENST00000469300 A6NNZ2 444 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 WDR64B1ANS9 1081 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 RGL2O15211 777 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 ZSCAN20P17040 1043 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-213ENST00000469300 TCP1P17987 556 aaKnown RBP16.45■□□□□ 0.22
LIMS2-213ENST00000469300 TUBB8Q3ZCM7 444 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 DISC1Q9NRI5 854 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 RNF146Q9NTX7 359 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 SAR1BQ9Y6B6 198 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 RNF8O76064 485 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 HOXA13P31271 388 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-213ENST00000469300 NEDD9Q14511 834 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 TAOK1Q7L7X3 1001 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 DAGLAQ9Y4D2 1042 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 IQSEC2Q5JU85 1478 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 RPS12P25398 132 aaKnown RBP16.45■□□□□ 0.22
LIMS2-213ENST00000469300 SFNP31947 248 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 SLC15A2Q16348 729 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 MTERF2Q49AM1 385 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 CCDC105Q8IYK2 499 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-213ENST00000469300 SELENOSQ9BQE4 189 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-213ENST00000469300 GNAT1P11488 350 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 SCARF1Q14162 830 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
LIMS2-213ENST00000469300 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 RAB20Q9NX57 234 aa16.45■□□□□ 0.22
LIMS2-213ENST00000469300 STAM2O75886 525 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 MTMR1Q13613 665 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 WHAMMP3Q1A5X7 153 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 FBXO33Q7Z6M2 555 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 ZNF526Q8TF50 670 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-213ENST00000469300 HYOU1Q9Y4L1 999 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 VWDEQ8N2E2 1590 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 RIOK3O14730 519 aaKnown RBP16.44■□□□□ 0.22
LIMS2-213ENST00000469300 DEPDC5O75140 1603 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 LPAR1Q92633 364 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 THAP9Q9H5L6 903 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 BARHL2Q9NY43 387 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 VPS18Q9P253 973 aa16.44■□□□□ 0.22
LIMS2-213ENST00000469300 EPN1Q9Y6I3 576 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms