RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PDCD2LQ9BRP1 358 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 UBAC1Q9BSL1 405 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 ZBED2Q9BTP6 218 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 OSBPL7Q9BZF2 842 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 KRT23Q9C075 422 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
HDAC3-204ENST00000469207 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 TRANK1O15050 2925 aa14.27□□□□□ -0.12
HDAC3-204ENST00000469207 PALM3A6NDB9 673 aaPredicted RBP14.27□□□□□ -0.13
HDAC3-204ENST00000469207 ZBTB5O15062 677 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 BAIAP3O94812 1187 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 PTH1RQ03431 593 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 PGM5Q15124 567 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 TRIM71Q2Q1W2 868 aaKnown RBP14.27□□□□□ -0.13
HDAC3-204ENST00000469207 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.27□□□□□ -0.133e-7■□□□□ 8.1
HDAC3-204ENST00000469207 STOX1Q6ZVD7 989 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 TELO2Q9Y4R8 837 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 MYH6P13533 1939 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.13
HDAC3-204ENST00000469207 HIP1O00291 1037 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 CYTH3O43739 400 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 GGPS1O95749 300 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 F2P00734 622 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 CXCL10P02778 98 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
HDAC3-204ENST00000469207 CELF3Q5SZQ8 465 aaKnown RBP14.26□□□□□ -0.13
HDAC3-204ENST00000469207 CNKSR3Q6P9H4 555 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 VSIG10LQ86VR7 867 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 CCDC155Q8N6L0 562 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 PPTC7Q8NI37 304 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 GDPD5Q8WTR4 605 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 PIBF1Q8WXW3 757 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 EMID1Q96A84 441 aaPredicted RBP14.26□□□□□ -0.13
HDAC3-204ENST00000469207 SPATA33Q96N06 139 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 MAF1Q9H063 256 aa14.26□□□□□ -0.13
HDAC3-204ENST00000469207 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 BAZ2BQ9UIF8 2168 aaKnown RBP14.25□□□□□ -0.13
HDAC3-204ENST00000469207 PPFIA4O75335 1185 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 CYP21A2P08686 494 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 PTK7Q13308 1070 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 C16orf70Q9BSU1 422 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 CNNM2Q9H8M5 875 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
HDAC3-204ENST00000469207 GJB5O95377 273 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 UBA1P22314 1058 aaKnown RBP14.24□□□□□ -0.13
HDAC3-204ENST00000469207 GHRHRQ02643 423 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 RBL2Q08999 1139 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 AAMPQ13685 434 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 IKBKEQ14164 716 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 GRM4Q14833 912 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 DBF4BQ8NFT6 615 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 RAD9AQ99638 391 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 KATNAL1Q9BW62 490 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 EPHX3Q9H6B9 360 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 RIOX1Q9H6W3 641 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 MLXIPQ9HAP2 919 aa14.24□□□□□ -0.13
HDAC3-204ENST00000469207 ABHD14A-ACY1A0A1B0GW23 586 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 LINC01553A4QN01 128 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 GCOM1H8Y6P7 765 aaPredicted RBP14.23□□□□□ -0.13
HDAC3-204ENST00000469207 IFIT3O14879 490 aaKnown RBP14.23□□□□□ -0.13
HDAC3-204ENST00000469207 POLR2MP0CAP2 368 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 HOXD8P13378 290 aaPredicted RBP14.23□□□□□ -0.13
HDAC3-204ENST00000469207 THPOP40225 353 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 NT5C2P49902 561 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 MRPS9P82933 396 aaKnown RBP14.23□□□□□ -0.13
HDAC3-204ENST00000469207 KHSRPQ92945 711 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDAC3-204ENST00000469207 HLA-CQ95604 372 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 C17orf80Q9BSJ5 609 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 RNPEPQ9H4A4 650 aa14.23□□□□□ -0.13
HDAC3-204ENST00000469207 RSPH10B2B2RC85 870 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 H3BRB1 525 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 TREHO43280 583 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 LGR5O75473 907 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 RSPH10BP0C881 870 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 TROAPQ12815 778 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 TTC22Q5TAA0 569 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
HDAC3-204ENST00000469207 TUT1Q9H6E5 874 aaKnown RBP14.22□□□□□ -0.13
HDAC3-204ENST00000469207 MAP3K20Q9NYL2 800 aaKnown RBP14.22□□□□□ -0.13
HDAC3-204ENST00000469207 SUPT16HQ9Y5B9 1047 aaKnown RBP14.22□□□□□ -0.13
HDAC3-204ENST00000469207 PNMA6FA0A0J9YX94 578 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 C17orf102A2RUQ5 167 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 E7EWF7 191 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 LGALS2P05162 132 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 SMIM10L2AP0DMW4 78 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 SMIM10L2BP0DMW5 78 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 CHMLP26374 656 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 CCND2P30279 289 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 ANTXR2P58335 489 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 ERVK-21P61565 698 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 TRDNQ13061 729 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 SEMA3FQ13275 785 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 COL9A3Q14050 684 aaPredicted RBP14.21□□□□□ -0.13
HDAC3-204ENST00000469207 KCNV1Q6PIU1 500 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 CYFIP1Q7L576 1253 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms