RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 JDP2Q8WYK2 163 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 JADE2Q9NQC1 790 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 LRWD1Q9UFC0 647 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 ZNRF3Q9ULT6 936 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 SIK3Q9Y2K2 1263 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 SUGT1Q9Y2Z0 365 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 LCA5LO95447 670 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 PLCG2P16885 1265 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 BTDP43251 543 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 CYP27A1Q02318 531 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 ITIH3Q06033 890 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 GRB10Q13322 594 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 CALCRLQ16602 461 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 RAB34Q9BZG1 259 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 CPVLQ9H3G5 476 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 NDST4Q9H3R1 872 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 SH2D4AQ9H788 454 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 SLC39A2Q9NP94 309 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 SNX12Q9UMY4 172 aa15.75■□□□□ 0.11
SMARCD3-205ENST00000469154 RNF40O75150 1001 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 PRELPP51888 382 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 LRRC63Q05C16 580 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 USP17L2Q6R6M4 530 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 ZNF572Q7Z3I7 529 aaPredicted RBP15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 CCDC84Q86UT8 332 aaPredicted RBP15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 TEX11Q8IYF3 940 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 GUF1Q8N442 669 aaKnown RBP15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 MMGT1Q8N4V1 131 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 LARP4BQ92615 738 aaKnown RBP15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 EEF2KMTQ96G04 330 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 PIGSQ96S52 555 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 IFIH1Q9BYX4 1025 aaKnown RBP15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 FAM204AQ9H8W3 233 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 BLOC1S4Q9NUP1 217 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 ZNF263O14978 683 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 PRLRP16471 622 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 TXKP42681 527 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 FOXR2Q6PJQ5 311 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 AFAP1L1Q8TED9 768 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 CRACR2AQ9BSW2 395 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 BIN2Q9UBW5 565 aaPredicted RBP15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 PCDHA13Q9Y5I0 950 aa15.74■□□□□ 0.11
SMARCD3-205ENST00000469154 LTBP3Q9NS15 1303 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 MYMKA6NI61 221 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 PDE2AO00408 941 aaPredicted RBP15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 SYF2O95926 243 aaKnown RBP15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 KIF11P52732 1056 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 CCNI2Q6ZMN8 369 aaPredicted RBP15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 SLF2Q8IX21 1173 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 ALS2CR12Q96Q35 445 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 EDEM3Q9BZQ6 932 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 DEF6Q9H4E7 631 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 DUSP10Q9Y6W6 482 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 GPR75-ASB3A0A0A6YYF3 556 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 ZNF185O15231 689 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 PHACTR2O75167 634 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 NOVP48745 357 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 ADCY7P51828 1080 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 FKBP1AP62942 108 aaKnown RBP15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 C2orf54Q08AI8 447 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 PSMD2Q13200 908 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 HPS3Q969F9 1004 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 TSG101Q99816 390 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 RIOX1Q9H6W3 641 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 ARHGAP20Q9P2F6 1191 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 ARFGEF1Q9Y6D6 1849 aa15.73■□□□□ 0.11
SMARCD3-205ENST00000469154 PRPF6O94906 941 aaKnown RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 EIF4A3P38919 411 aaKnown RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 SLC20A2Q08357 652 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 RAD54LQ92698 747 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 CEP95Q96GE4 821 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 FAM163AQ96GL9 167 aaPredicted RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 TRERF1Q96PN7 1200 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 SELENOOQ9BVL4 669 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 TMEM260Q9NX78 707 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 DAGLAQ9Y4D2 1042 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 HYOU1Q9Y4L1 999 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 ZC3H4Q9UPT8 1303 aaKnown RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 MYH10P35580 1976 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 PLIN4Q96Q06 1357 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 PLEKP08567 350 aaPredicted RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 TCP1P17987 556 aaKnown RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 CXCL9Q07325 125 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 PDE4CQ08493 712 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 PDIA5Q14554 519 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 KRT26Q7Z3Y9 468 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 CREG2Q8IUH2 290 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 RIC8AQ9NPQ8 531 aa15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 FAM207AQ9NSI2 230 aaPredicted RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
SMARCD3-205ENST00000469154 ATAD5Q96QE3 1844 aa15.71■□□□□ 0.11
SMARCD3-205ENST00000469154 PJA2O43164 708 aa15.71■□□□□ 0.11
SMARCD3-205ENST00000469154 AKR1B10O60218 316 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms