RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PABPC1P11940 636 aaKnown RBP7.36□□□□□ -1.23
LSM5-209ENST00000468872 GYS2P54840 703 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 SLURP1P55000 103 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 TCEA2Q15560 299 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 SMARCC2Q8TAQ2 1214 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 OSBP2Q969R2 916 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 CDC6Q99741 560 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 DHRS4Q9BTZ2 278 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 MRPS23Q9Y3D9 190 aaKnown RBP7.36□□□□□ -1.23
LSM5-209ENST00000468872 CD2APQ9Y5K6 639 aa7.36□□□□□ -1.23
LSM5-209ENST00000468872 TRBV23-1A0A0A0MS06 115 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 A0A1B0GTL3 188 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 PRODHO43272 600 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 NCLP19338 710 aaKnown RBP7.35□□□□□ -1.23
LSM5-209ENST00000468872 KCNC1P48547 511 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 DLX2Q07687 328 aaPredicted RBP7.35□□□□□ -1.23
LSM5-209ENST00000468872 CACNB2Q08289 660 aaPredicted RBP7.35□□□□□ -1.23
LSM5-209ENST00000468872 IQCEQ6IPM2 695 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 LIPIQ6XZB0 460 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 TEX2Q8IWB9 1127 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 SYNPOQ8N3V7 929 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 CXorf38Q8TB03 319 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 ZNF526Q8TF50 670 aaPredicted RBP7.35□□□□□ -1.23
LSM5-209ENST00000468872 IER2Q9BTL4 223 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 BTG4Q9NY30 223 aa7.35□□□□□ -1.23
LSM5-209ENST00000468872 CCDC163A0A0D9SF12 145 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 SH3D21A4FU49 640 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 C22orf46C9J442 243 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 SNRPB2P08579 225 aaKnown RBP7.34□□□□□ -1.23
LSM5-209ENST00000468872 HOXC12P31275 282 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 ECI1P42126 302 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 SF1Q15637 639 aaKnown RBP7.34□□□□□ -1.23
LSM5-209ENST00000468872 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 E4F1Q66K89 784 aaPredicted RBP7.34□□□□□ -1.23
LSM5-209ENST00000468872 NSMFQ6X4W1 530 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 FRMD5Q7Z6J6 570 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 DCP2Q8IU60 420 aaKnown RBP7.34□□□□□ -1.23
LSM5-209ENST00000468872 CCDC103Q8IW40 242 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 SCUBE1Q8IWY4 988 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 NOX5Q96PH1 765 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 SLKQ9H2G2 1235 aaPredicted RBP7.34□□□□□ -1.23
LSM5-209ENST00000468872 ADAM7Q9H2U9 754 aa7.34□□□□□ -1.23
LSM5-209ENST00000468872 NCOA5Q9HCD5 579 aaKnown RBP7.34□□□□□ -1.23
LSM5-209ENST00000468872 TMEFF2Q9UIK5 374 aaPredicted RBP7.34□□□□□ -1.23
LSM5-209ENST00000468872 ARNTLO00327 626 aa7.33□□□□□ -1.24
LSM5-209ENST00000468872 SCG5P05408 212 aa7.33□□□□□ -1.24
LSM5-209ENST00000468872 SYN1P17600 705 aa7.33□□□□□ -1.24
LSM5-209ENST00000468872 GFRA1P56159 465 aa7.33□□□□□ -1.24
LSM5-209ENST00000468872 RPL11P62913 178 aaKnown RBP7.33□□□□□ -1.24
LSM5-209ENST00000468872 DALRD3Q5D0E6 543 aaKnown RBP7.33□□□□□ -1.24
LSM5-209ENST00000468872 KREMEN2Q8NCW0 462 aa7.33□□□□□ -1.24
LSM5-209ENST00000468872 GPATCH3Q96I76 525 aa7.33□□□□□ -1.24
LSM5-209ENST00000468872 AP5M1Q9H0R1 490 aa7.33□□□□□ -1.24
LSM5-209ENST00000468872 TIMM13Q9Y5L4 95 aaPredicted RBP7.33□□□□□ -1.24
LSM5-209ENST00000468872 SGSM2O43147 1006 aa7.32□□□□□ -1.24
LSM5-209ENST00000468872 DLX3O60479 287 aa7.32□□□□□ -1.24
LSM5-209ENST00000468872 FPR2P25090 351 aa7.32□□□□□ -1.24
LSM5-209ENST00000468872 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
LSM5-209ENST00000468872 PRSS53Q2L4Q9 553 aa7.32□□□□□ -1.24
LSM5-209ENST00000468872 RNF187Q5TA31 235 aaPredicted RBP7.32□□□□□ -1.24
LSM5-209ENST00000468872 DIO2Q92813 273 aa7.32□□□□□ -1.24
LSM5-209ENST00000468872 TEPSINQ96N21 525 aa7.32□□□□□ -1.24
LSM5-209ENST00000468872 IPO9Q96P70 1041 aaKnown RBP7.32□□□□□ -1.24
LSM5-209ENST00000468872 SPATA25Q9BR10 227 aa7.32□□□□□ -1.24
LSM5-209ENST00000468872 PLD2O14939 933 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 MEFVO15553 781 aaPredicted RBP7.31□□□□□ -1.24
LSM5-209ENST00000468872 RAPGEF3O95398 923 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 CPP00450 1065 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 C8BP07358 591 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
LSM5-209ENST00000468872 KCNAB2Q13303 367 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 PABPC4Q13310 644 aaKnown RBP eCLIP7.31□□□□□ -1.242e-26■□□□□ 10.8
LSM5-209ENST00000468872 ACBD5Q5T8D3 534 aaPredicted RBP7.31□□□□□ -1.24
LSM5-209ENST00000468872 FILIP1Q7Z7B0 1213 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 RIOX2Q8IUF8 465 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 Q8N1Y9 231 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 SEC14L1Q92503 715 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 DDX11Q96FC9 970 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 IFT57Q9NWB7 429 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 PRKAB1Q9Y478 270 aa7.31□□□□□ -1.24
LSM5-209ENST00000468872 RFPL3O75679 317 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 CYP2C8P10632 490 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 BCL6P41182 706 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 KCNJ6P48051 423 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 SLC6A11P48066 632 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 MAP4K2Q12851 820 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 TESK1Q15569 626 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 NTRK3Q16288 839 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 MROH9Q5TGP6 573 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 ETV3LQ6ZN32 361 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 CEP68Q76N32 757 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 NLRP10Q86W26 655 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 MIB1Q86YT6 1006 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 CARFQ8N187 725 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 TMEM145Q8NBT3 493 aa7.3□□□□□ -1.24
LSM5-209ENST00000468872 KCTD13Q8WZ19 329 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms