RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 SCAIQ8N9R8 606 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 VPS37AQ8NEZ2 397 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 PI4K2BQ8TCG2 481 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 CAVIN3Q969G5 261 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 CCT7Q99832 543 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 TTF2Q9UNY4 1162 aaKnown RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 USP42Q9H9J4 1324 aaKnown RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 AHDC1Q5TGY3 1603 aaPredicted RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 COL14A1Q05707 1796 aaKnown RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 IQCA1LA6NCM1 817 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 TRAPPC3O43617 180 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 SURF6O75683 361 aaKnown RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 FUT4P22083 530 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 TNFRSF8P28908 595 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 GBP1P32455 592 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 TUBP50607 506 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 EPHB4P54760 987 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 ATP11AP98196 1134 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 TOGARAM2Q6ZUX3 1019 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 UNC5CLQ8IV45 518 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 WDR75Q8IWA0 830 aaKnown RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 MLKLQ8NB16 471 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 GABPB2Q8TAK5 448 aaPredicted RBP10.11□□□□□ -0.79
LCA5-203ENST00000467898 FBF1Q8TES7 1133 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 ATP8B4Q8TF62 1192 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 SUCLG2Q96I99 432 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 CDK5RAP3Q96JB5 506 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 TUBGCP5Q96RT8 1024 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 RPS6KC1Q96S38 1066 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 IL1RAPL2Q9NP60 686 aa10.11□□□□□ -0.79
LCA5-203ENST00000467898 CASZ1Q86V15 1759 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 ENPP1P22413 925 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 PCK1P35558 622 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 AK2P54819 239 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 LACTBP83111 547 aaPredicted RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 ITIH4Q14624 930 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 CFAP58Q5T655 872 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 RNF220Q5VTB9 566 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 SLC2A7Q6PXP3 512 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 PNMA8AQ86V59 439 aaPredicted RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 ANKS4BQ8N8V4 417 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 XAGE3Q8WTP9 111 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 CLK4Q9HAZ1 481 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 PANK4Q9NVE7 773 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 CCT8L1PA6NM43 557 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 TTC34A8MYJ7 566 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 GRM8O00222 908 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 CLASP2O75122 1294 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 DDX58O95786 925 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 POTEIP0CG38 1075 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 ZNF131P52739 623 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 UBASH3AP57075 661 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 CABP4P57796 275 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 GUCY1A3Q02108 690 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 FAM160A1Q05DH4 1040 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 AIMP1Q12904 312 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 PDCD4Q53EL6 469 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 DAB2IPQ5VWQ8 1189 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 LARP1Q6PKG0 1096 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 RUFY3Q7L099 469 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 ITPKCQ96DU7 683 aa10.1□□□□□ -0.79
LCA5-203ENST00000467898 SCHIP1Q9P0W5 487 aaPredicted RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 LARSQ9P2J5 1176 aaKnown RBP10.1□□□□□ -0.79
LCA5-203ENST00000467898 ITGB4P16144 1822 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 A0A0J9YVX5 310 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 DYTNA2CJ06 578 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 NEURL1BA8MQ27 555 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 ASLP04424 464 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 MYL6BP14649 208 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 NQO1P15559 274 aaKnown RBP10.09□□□□□ -0.79
LCA5-203ENST00000467898 TMEM259Q4ZIN3 620 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 ATL3Q6DD88 541 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 COPS6Q7L5N1 327 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 ZNF804AQ7Z570 1209 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 RNF10Q8N5U6 811 aaKnown RBP10.09□□□□□ -0.79
LCA5-203ENST00000467898 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 GBP5Q96PP8 586 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 METTL22Q9BUU2 404 aaPredicted RBP10.09□□□□□ -0.79
LCA5-203ENST00000467898 DLGAP2Q9P1A6 1054 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 ERVV-2B6SEH9 535 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 HIP1RO75146 1068 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 RAB15P59190 212 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 NCAPHQ15003 741 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 BOLA3Q53S33 107 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 MRPL44Q9H9J2 332 aaKnown RBP10.09□□□□□ -0.79
LCA5-203ENST00000467898 PARVBQ9HBI1 364 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 ANO2Q9NQ90 1003 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 NDUFA13Q9P0J0 144 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 TTC7AQ9ULT0 858 aaPredicted RBP10.09□□□□□ -0.79
LCA5-203ENST00000467898 PCDHB2Q9Y5E7 798 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 DISP2A7MBM2 1401 aa10.09□□□□□ -0.79
LCA5-203ENST00000467898 POTEFA5A3E0 1075 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms