RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 GBF1Q92538 1859 aa17.08■□□□□ 0.33
ATPAF2-204ENST00000467560 hCG_1642624A0A1W2PR95 340 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 DDAH1O94760 285 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 CCND2P30279 289 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 MCM5P33992 734 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 MFSD10Q14728 455 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 RAB30Q15771 203 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 TCTN1Q2MV58 587 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 USP17L6PQ6QN14 398 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 CASC1Q6TDU7 716 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 MAP3K14Q99558 947 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 SPZ1Q9BXG8 430 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 MTIF3Q9H2K0 278 aaKnown RBP17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 PRDM6Q9NQX0 595 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 MSRAQ9UJ68 235 aa17.08■□□□□ 0.32
ATPAF2-204ENST00000467560 MEIS2O14770 477 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 ARHGEF15O94989 841 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 PFKMP08237 780 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 ATP2A2P16615 1042 aaKnown RBP17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 TRAF7Q6Q0C0 670 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 RETREG2Q8NC44 543 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 CTCFLQ8NI51 663 aaPredicted RBP17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 C16orf70Q9BSU1 422 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 RTEL1Q9NZ71 1219 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 REV3LO60673 3130 aa17.07■□□□□ 0.32
ATPAF2-204ENST00000467560 TANC1Q9C0D5 1861 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 RFC2P35250 354 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 BFSP2Q13515 415 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 TRIM71Q2Q1W2 868 aaKnown RBP17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 NFXL1Q6ZNB6 911 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 C7orf31Q8N865 590 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 RRP36Q96EU6 259 aaKnown RBP17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 INPP4AQ96PE3 977 aaPredicted RBP17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 MTA3Q9BTC8 594 aa17.06■□□□□ 0.32
ATPAF2-204ENST00000467560 NBNO60934 754 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 PPFIA4O75335 1185 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 LIFRP42702 1097 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 TRAF1Q13077 416 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 MBTPS1Q14703 1052 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 KCNV1Q6PIU1 500 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 FTOQ9C0B1 505 aaKnown RBP eCLIP17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 SLC28A3Q9HAS3 691 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 PCDHA11Q9Y5I1 949 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 TRIP12Q14669 1992 aaPredicted RBP17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 MYH7BA7E2Y1 1941 aa17.05■□□□□ 0.32
ATPAF2-204ENST00000467560 MUC3AQ02505 3323 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 SPATA31C2B4DYI2 1134 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 TGFB3P10600 412 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 CKBP12277 381 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 SELPP16109 830 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 ICAM3P32942 547 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 KIF5BP33176 963 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 RBL2Q08999 1139 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 TMTC3Q6ZXV5 915 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 LRRC8DQ7L1W4 858 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 CENPQQ7L2Z9 268 aaPredicted RBP17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 SPRED2Q7Z698 418 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 CAGE1Q8TC20 777 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 AFAP1L1Q8TED9 768 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 PPM1EQ8WY54 764 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 MLXIPQ9HAP2 919 aa17.04■□□□□ 0.32
ATPAF2-204ENST00000467560 XIRP2A4UGR9 3374 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 EPOPA6NHQ4 379 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 PIK3CDO00329 1044 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 CA3P07451 260 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 PPP2R2DQ66LE6 453 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 CYFIP1Q7L576 1253 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 FANCBQ8NB91 859 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 KATNAL1Q9BW62 490 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 BRPF3Q9ULD4 1205 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
ATPAF2-204ENST00000467560 RFXAPO00287 272 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 CXCL10P02778 98 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 LGALS2P05162 132 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 ACTN1P12814 892 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 EXOSC10Q01780 885 aaKnown RBP17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 PTK7Q13308 1070 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 CCDC85BQ15834 202 aaPredicted RBP17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 UBE2SQ16763 222 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 ZNF618Q5T7W0 954 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 PCNX4Q63HM2 1172 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 MICU3Q86XE3 530 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 TRIM50Q86XT4 487 aa17.02■□□□□ 0.32
ATPAF2-204ENST00000467560 HERC6Q8IVU3 1022 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms