RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CXXC1Q9P0U4 656 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-211ENST00000467553 COL20A1Q9P218 1284 aa16.22■□□□□ 0.19
CCHCR1-211ENST00000467553 hCG_1642624A0A1W2PR95 340 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 GRXCR1A8MXD5 290 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 GCOM1H8Y6P7 765 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 OPLAHO14841 1288 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 POLR2MP0CAP2 368 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 HOXA13P31271 388 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 PBX2P40425 430 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 HSD17B4P51659 736 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 DGKDQ16760 1214 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 RTN1Q16799 776 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 BRF1Q92994 677 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 PXMP2Q9NR77 195 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 RBM28Q9NW13 759 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 NOD1Q9Y239 953 aa16.21■□□□□ 0.19
CCHCR1-211ENST00000467553 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 ARIH2O95376 493 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 NR3C2P08235 984 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 MMP3P08254 477 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 IQCF3P0C7M6 154 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 TGFB3P10600 412 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 CYP2C9P11712 490 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 ATP2A2P16615 1042 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 ARHGAP1Q07960 439 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 TMTC3Q6ZXV5 915 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 RUFY3Q7L099 469 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 FCHSD1Q86WN1 690 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 COPS5Q92905 334 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 SCLYQ96I15 445 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 SLC9A7Q96T83 725 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 DDX41Q9UJV9 622 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 GBF1Q92538 1859 aa16.2■□□□□ 0.18
CCHCR1-211ENST00000467553 ZBBXA8MT70 800 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 BAIAP3O94812 1187 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 LY6KQ17RY6 165 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 AFAP1L1Q8TED9 768 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 AFG1LQ8WV93 481 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 VWCEQ96DN2 955 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
CCHCR1-211ENST00000467553 TANC1Q9C0D5 1861 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 CDC27P30260 824 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 ADD1P35611 737 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 RBL2Q08999 1139 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 PTGISQ16647 500 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 TJAP1Q5JTD0 557 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 ATXN2LQ8WWM7 1075 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 NKX2-4Q9H2Z4 354 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 PRDM12Q9H4Q4 367 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 V9GY48 417 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-211ENST00000467553 MYH7BA7E2Y1 1941 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 CHD7Q9P2D1 2997 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 TRANK1O15050 2925 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 KIF28PB7ZC32 967 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 PPFIA4O75335 1185 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 STAM2O75886 525 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 PPP2R2DQ66LE6 453 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 DEFB128Q7Z7B8 93 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 VSIG10LQ86VR7 867 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 CUL5Q93034 780 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 PDCD2LQ9BRP1 358 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 TM6SF1Q9BZW5 370 aa16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 TSPYL2Q9H2G4 693 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 YBX2Q9Y2T7 364 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 TRIP12Q14669 1992 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-211ENST00000467553 SCN5AQ14524 2016 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 CCDC196A0A1B0GTZ2 297 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 EFCAB14O75071 495 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 HOXD8P13378 290 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 POU3F3P20264 500 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 USP17L6PQ6QN14 398 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 HEATR3Q7Z4Q2 680 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 FBXL16Q8N461 479 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 C7orf31Q8N865 590 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 KAT2BQ92831 832 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 LARP6Q9BRS8 491 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 AGXT2Q9BYV1 514 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 PSTPIP2Q9H939 334 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
CCHCR1-211ENST00000467553 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-211ENST00000467553 SEC24BO95487 1268 aa16.15■□□□□ 0.18
CCHCR1-211ENST00000467553 F2P00734 622 aa16.15■□□□□ 0.18
CCHCR1-211ENST00000467553 SELPP16109 830 aa16.15■□□□□ 0.18
CCHCR1-211ENST00000467553 CCND2P30279 289 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms