RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 SLC18A3Q16572 532 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 SV2BQ7L1I2 683 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 AIPL1Q9NZN9 384 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 ZBTB1Q9Y2K1 713 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 GCOM1H8Y6P7 765 aaPredicted RBP17.14■□□□□ 0.33
CHD1L-205ENST00000467213 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 MYZAPP0CAP1 466 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 FCER1AP12319 257 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 VEGFAP15692 232 aaPredicted RBP17.14■□□□□ 0.33
CHD1L-205ENST00000467213 SLC1A4P43007 532 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 MRPL12P52815 198 aaKnown RBP17.14■□□□□ 0.33
CHD1L-205ENST00000467213 RASSF7Q02833 373 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 IFI16Q16666 785 aaKnown RBP17.14■□□□□ 0.33
CHD1L-205ENST00000467213 SKIDA1Q1XH10 827 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 SEC14L1Q92503 715 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 CEP63Q96MT8 703 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 PLAAQ9Y263 795 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 NCK2O43639 380 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 CXCR5P32302 372 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.334e-8■■■■□ 20.2
CHD1L-205ENST00000467213 SFMBT2Q5VUG0 894 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 CCDC121Q6ZUS5 278 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 TSG101Q99816 390 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
CHD1L-205ENST00000467213 SPZ1Q9BXG8 430 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 FAM207AQ9NSI2 230 aaPredicted RBP17.13■□□□□ 0.33
CHD1L-205ENST00000467213 MAD2L2Q9UI95 211 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 CCDC188H7C350 402 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 SLC26A4O43511 780 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 ECHS1P30084 290 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 HDLBPQ00341 1268 aaKnown RBP17.13■□□□□ 0.33
CHD1L-205ENST00000467213 XRCC4Q13426 336 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 INF2Q27J81 1249 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 NBPF9Q3BBW0 867 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 TTC19Q6DKK2 380 aaPredicted RBP17.13■□□□□ 0.33
CHD1L-205ENST00000467213 SLC40A1Q9NP59 571 aa17.13■□□□□ 0.33
CHD1L-205ENST00000467213 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 SMIM22K7EJ46 135 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 GFPT1Q06210 699 aaPredicted RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 KCNMA1Q12791 1236 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 ZNF384Q8TF68 577 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 KDM4CQ9H3R0 1056 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 CNOT10Q9H9A5 744 aaKnown RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 PALMO75781 387 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 CDR1P51861 262 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 PDIA5Q14554 519 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 ZC3H3Q8IXZ2 948 aaKnown RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 PNMA1Q8ND90 353 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 SGSM3Q96HU1 749 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
CHD1L-205ENST00000467213 TNRC6CQ9HCJ0 1690 aaKnown RBP17.12■□□□□ 0.33
CHD1L-205ENST00000467213 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 SNAP23O00161 211 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 DNAJC8O75937 253 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 GNA11P29992 359 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 MS4A14Q96JA4 679 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 EHD2Q9NZN4 543 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 TSPY2A6NKD2 308 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 SLC8A1P32418 973 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 HSD17B3P37058 310 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 USP11P51784 963 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 CEP85LQ5SZL2 805 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 NEK8Q86SG6 692 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 KRT12Q99456 494 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 SLITRK6Q9H5Y7 841 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 SWAP70Q9UH65 585 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 BZW2Q9Y6E2 419 aaKnown RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 E7EVH7 732 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 RAD51CO43502 376 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 NOL4O94818 638 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 SNCBQ16143 134 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 STAG2Q8N3U4 1231 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 GIMAP7Q8NHV1 300 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 BLOC1S4Q9NUP1 217 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 SMARCAL1Q9NZC9 954 aa17.11■□□□□ 0.33
CHD1L-205ENST00000467213 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
CHD1L-205ENST00000467213 NTSR2O95665 410 aa17.1■□□□□ 0.33
CHD1L-205ENST00000467213 EIF3BP55884 814 aaKnown RBP17.1■□□□□ 0.33
CHD1L-205ENST00000467213 PPP2R2AP63151 447 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms