RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 FPR2P25090 351 aa6.94□□□□□ -1.3
XRN1-206ENST00000467077 RPL11P62913 178 aaKnown RBP6.94□□□□□ -1.3
XRN1-206ENST00000467077 USP39Q53GS9 565 aaKnown RBP6.94□□□□□ -1.3
XRN1-206ENST00000467077 IFNL2Q8IZJ0 200 aa6.94□□□□□ -1.3
XRN1-206ENST00000467077 CRACR2BQ8N4Y2 399 aaPredicted RBP6.94□□□□□ -1.3
XRN1-206ENST00000467077 IKZF4Q9H2S9 585 aa6.94□□□□□ -1.3
XRN1-206ENST00000467077 SEC61A2Q9H9S3 476 aa6.94□□□□□ -1.3
XRN1-206ENST00000467077 ZFR2Q9UPR6 939 aaKnown RBP6.94□□□□□ -1.3
XRN1-206ENST00000467077 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
XRN1-206ENST00000467077 COA3Q9Y2R0 106 aaPredicted RBP6.94□□□□□ -1.3
XRN1-206ENST00000467077 SLC7A5Q01650 507 aa6.93□□□□□ -1.3
XRN1-206ENST00000467077 SCRN1Q12765 414 aa6.93□□□□□ -1.3
XRN1-206ENST00000467077 DNAJC10Q8IXB1 793 aa6.93□□□□□ -1.3
XRN1-206ENST00000467077 TRMT2BQ96GJ1 504 aaKnown RBP6.93□□□□□ -1.3
XRN1-206ENST00000467077 LMF1Q96S06 567 aa6.93□□□□□ -1.3
XRN1-206ENST00000467077 PPT2Q9UMR5 302 aa6.93□□□□□ -1.3
XRN1-206ENST00000467077 INHBCP55103 352 aa6.92□□□□□ -1.3
XRN1-206ENST00000467077 LSM12Q3MHD2 195 aaKnown RBP6.92□□□□□ -1.3
XRN1-206ENST00000467077 GNRHR2Q96P88 292 aa6.92□□□□□ -1.3
XRN1-206ENST00000467077 LRRC37BQ96QE4 947 aa6.92□□□□□ -1.3
XRN1-206ENST00000467077 CRBNQ96SW2 442 aa6.92□□□□□ -1.3
XRN1-206ENST00000467077 GPRC5CQ9NQ84 441 aa6.92□□□□□ -1.3
XRN1-206ENST00000467077 ADAM29Q9UKF5 820 aa6.92□□□□□ -1.3
XRN1-206ENST00000467077 A0A087X1B8 175 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 MYO1BO43795 1136 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 CNOT4O95628 575 aaKnown RBP6.91□□□□□ -1.3
XRN1-206ENST00000467077 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 COPS5Q92905 334 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 AKT3Q9Y243 479 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 PCDHB4Q9Y5E5 795 aa6.91□□□□□ -1.3
XRN1-206ENST00000467077 FOXS1O43638 330 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 KCNH1O95259 989 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 GTF2A2P52657 109 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 IGFL4Q6B9Z1 124 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 TCTN3Q6NUS6 607 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 CEP68Q76N32 757 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 NEU4Q8WWR8 484 aaPredicted RBP6.9□□□□□ -1.3
XRN1-206ENST00000467077 CRAMP1Q96RY5 1269 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 PCDHB10Q9UN67 800 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 TIMELESSQ9UNS1 1208 aa6.9□□□□□ -1.3
XRN1-206ENST00000467077 TIMM13Q9Y5L4 95 aaPredicted RBP6.9□□□□□ -1.3
XRN1-206ENST00000467077 HGSO14964 777 aaPredicted RBP6.89□□□□□ -1.31
XRN1-206ENST00000467077 NARSO43776 548 aaKnown RBP6.89□□□□□ -1.31
XRN1-206ENST00000467077 COMTP21964 271 aa6.89□□□□□ -1.31
XRN1-206ENST00000467077 INF2Q27J81 1249 aa6.89□□□□□ -1.31
XRN1-206ENST00000467077 IQCEQ6IPM2 695 aa6.89□□□□□ -1.31
XRN1-206ENST00000467077 TMC5Q6UXY8 1006 aa6.89□□□□□ -1.31
XRN1-206ENST00000467077 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
XRN1-206ENST00000467077 TMEM169Q96HH4 297 aa6.89□□□□□ -1.31
XRN1-206ENST00000467077 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
XRN1-206ENST00000467077 Q8N1Y9 231 aa6.88□□□□□ -1.31
XRN1-206ENST00000467077 NUDT10Q8NFP7 164 aa6.88□□□□□ -1.31
XRN1-206ENST00000467077 EDAQ92838 391 aa6.88□□□□□ -1.31
XRN1-206ENST00000467077 NUDT11Q96G61 164 aa6.88□□□□□ -1.31
XRN1-206ENST00000467077 X6R8D5 127 aa6.88□□□□□ -1.31
XRN1-206ENST00000467077 ERCC3P19447 782 aa6.87□□□□□ -1.31
XRN1-206ENST00000467077 STEAP3Q658P3 488 aa6.87□□□□□ -1.31
XRN1-206ENST00000467077 ZG16BQ96DA0 208 aa6.87□□□□□ -1.31
XRN1-206ENST00000467077 TRAIPQ9BWF2 469 aa6.87□□□□□ -1.31
XRN1-206ENST00000467077 TCRBV5S2A0A599 114 aa6.86□□□□□ -1.31
XRN1-206ENST00000467077 ANKRD34BA5PLL1 514 aa6.86□□□□□ -1.31
XRN1-206ENST00000467077 CCDC81Q6ZN84 652 aa6.86□□□□□ -1.31
XRN1-206ENST00000467077 EXTL1Q92935 676 aa6.86□□□□□ -1.31
XRN1-206ENST00000467077 NOP56O00567 594 aaKnown RBP6.85□□□□□ -1.31
XRN1-206ENST00000467077 ADH4P08319 380 aa6.85□□□□□ -1.31
XRN1-206ENST00000467077 BCL6P41182 706 aa6.85□□□□□ -1.31
XRN1-206ENST00000467077 VASNQ6EMK4 673 aa6.85□□□□□ -1.31
XRN1-206ENST00000467077 Q6ZUG5 572 aa6.85□□□□□ -1.31
XRN1-206ENST00000467077 NLRP10Q86W26 655 aa6.85□□□□□ -1.31
XRN1-206ENST00000467077 C19orf47Q8N9M1 422 aaKnown RBP6.85□□□□□ -1.31
XRN1-206ENST00000467077 EMC9Q9Y3B6 208 aa6.85□□□□□ -1.31
XRN1-206ENST00000467077 PCSK5Q92824 1860 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 FBXO21O94952 628 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 LRG1P02750 347 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 NAT2P11245 290 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
XRN1-206ENST00000467077 E4F1Q66K89 784 aaPredicted RBP6.84□□□□□ -1.31
XRN1-206ENST00000467077 GPR155Q7Z3F1 870 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 TAX1BP1Q86VP1 789 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 C1orf210Q8IVY1 113 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 BVESQ8NE79 360 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 DIO2Q92813 273 aa6.84□□□□□ -1.31
XRN1-206ENST00000467077 TMEFF2Q9UIK5 374 aaPredicted RBP6.84□□□□□ -1.31
XRN1-206ENST00000467077 MAFKO60675 156 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 KLHL18O94889 574 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 COL6A1P12109 1028 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 DGCR2P98153 550 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 KCNAB2Q13303 367 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 MRPL58Q14197 206 aaKnown RBP6.83□□□□□ -1.32
XRN1-206ENST00000467077 FAM89AQ96GI7 184 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 CHAMP1Q96JM3 812 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 DLL4Q9NR61 685 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 MYOTQ9UBF9 498 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 APEX2Q9UBZ4 518 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 TNFRSF18Q9Y5U5 241 aa6.83□□□□□ -1.32
XRN1-206ENST00000467077 CHGBP05060 677 aa6.82□□□□□ -1.32
XRN1-206ENST00000467077 ACO1P21399 889 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms