RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
NPHP4-205ENST00000466897 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
NPHP4-205ENST00000466897 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
NPHP4-205ENST00000466897 SEPT4O43236 478 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 BMP15O95972 392 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 AKR1A1P14550 325 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 TRIM32Q13049 653 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 SEMA3FQ13275 785 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 CCDC144BQ3MJ40 725 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 PRR16Q569H4 304 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 EEPD1Q7L9B9 569 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 GIMAP8Q8ND71 665 aaPredicted RBP17.23■□□□□ 0.35
NPHP4-205ENST00000466897 TRPV1Q8NER1 839 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 CYP2W1Q8TAV3 490 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 WDR11Q9BZH6 1224 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 KCNMB3Q9NPA1 279 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
NPHP4-205ENST00000466897 KCNH7Q9NS40 1196 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 FAM184BQ9ULE4 1060 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 Q9Y3F1 56 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 MRVI1Q9Y6F6 885 aa17.23■□□□□ 0.35
NPHP4-205ENST00000466897 MORC2Q9Y6X9 1032 aaPredicted RBP17.23■□□□□ 0.35
NPHP4-205ENST00000466897 NFASCO94856 1347 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 LAD1O00515 517 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 WNT7AO00755 349 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 SLC37A4O43826 429 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 NEMFO60524 1076 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 MSCO60682 206 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 DUSP28Q4G0W2 176 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 SEPT14Q6ZU15 432 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 ETNPPLQ8TBG4 499 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 SH3TC2Q8TF17 1288 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 FAM20AQ96MK3 541 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 AGO4Q9HCK5 861 aaKnown RBP17.22■□□□□ 0.35
NPHP4-205ENST00000466897 HMX1Q9NP08 348 aaPredicted RBP17.22■□□□□ 0.35
NPHP4-205ENST00000466897 PDGFCQ9NRA1 345 aa17.22■□□□□ 0.35
NPHP4-205ENST00000466897 DDX41Q9UJV9 622 aaKnown RBP17.22■□□□□ 0.35
NPHP4-205ENST00000466897 ARP10275 920 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 TXNP10599 105 aaKnown RBP17.21■□□□□ 0.35
NPHP4-205ENST00000466897 KCNA2P16389 499 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 ADCYAP1R1P41586 468 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 NEDD9Q14511 834 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 SLFN12Q8IYM2 578 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 EMID1Q96A84 441 aaPredicted RBP17.21■□□□□ 0.35
NPHP4-205ENST00000466897 ZNF333Q96JL9 665 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
NPHP4-205ENST00000466897 PCDHB6Q9Y5E3 794 aa17.21■□□□□ 0.35
NPHP4-205ENST00000466897 IPO5O00410 1097 aaKnown RBP17.2■□□□□ 0.34
NPHP4-205ENST00000466897 MSH4O15457 936 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 DUSP11O75319 330 aaKnown RBP17.2■□□□□ 0.34
NPHP4-205ENST00000466897 ARIH2O95376 493 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 UBA1P22314 1058 aaKnown RBP17.2■□□□□ 0.34
NPHP4-205ENST00000466897 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
NPHP4-205ENST00000466897 MCM7P33993 719 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 NKX3-2P78367 333 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 TNFAIP2Q03169 654 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 SLC5A5Q92911 643 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 ABHD8Q96I13 439 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
NPHP4-205ENST00000466897 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
NPHP4-205ENST00000466897 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 RIT2Q99578 217 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 ZNF577Q9BSK1 485 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 MCOLN1Q9GZU1 580 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
NPHP4-205ENST00000466897 TBC1D22BQ9NU19 505 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 CEP131Q9UPN4 1083 aa17.2■□□□□ 0.34
NPHP4-205ENST00000466897 SMPD1P17405 629 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 PRPHP41219 470 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 NASPP49321 788 aaPredicted RBP17.19■□□□□ 0.34
NPHP4-205ENST00000466897 ATP2C1P98194 919 aaPredicted RBP17.19■□□□□ 0.34
NPHP4-205ENST00000466897 SP2Q02086 613 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 NBR1Q14596 966 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 ZNF174Q15697 407 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 CALCRLQ16602 461 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
NPHP4-205ENST00000466897 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.19■□□□□ 0.34
NPHP4-205ENST00000466897 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
NPHP4-205ENST00000466897 MYH9P35579 1960 aaKnown RBP17.19■□□□□ 0.34
NPHP4-205ENST00000466897 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.18■□□□□ 0.34
NPHP4-205ENST00000466897 ADCY6O43306 1168 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 ATP9AO75110 1047 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 BAG4O95429 457 aaKnown RBP17.18■□□□□ 0.34
NPHP4-205ENST00000466897 GH1P01241 217 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 OR52Z1P0C646 297 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 CAPN2P17655 700 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 ITGB3BPQ13352 177 aaPredicted RBP17.18■□□□□ 0.34
NPHP4-205ENST00000466897 LAMC2Q13753 1193 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 LY6KQ17RY6 165 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 CELF3Q5SZQ8 465 aaKnown RBP17.18■□□□□ 0.34
NPHP4-205ENST00000466897 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
NPHP4-205ENST00000466897 ANO1Q5XXA6 986 aa17.18■□□□□ 0.34
NPHP4-205ENST00000466897 ARL6IP4Q66PJ3 421 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms