RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 RBL2Q08999 1139 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 IFT88Q13099 833 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 KCNA10Q16322 511 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 UTP14CQ5TAP6 766 aaKnown RBP6.79□□□□□ -1.32
LRCH3-212ENST00000466845 CYP2R1Q6VVX0 501 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 SKAP1Q86WV1 359 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 ACRBPQ8NEB7 543 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 CFAP53Q96M91 514 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 CDADC1Q9BWV3 514 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 GP6Q9HCN6 339 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 TAF6LQ9Y6J9 622 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 ERICH3Q5RHP9 1530 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 GRIN2AQ12879 1464 aa6.79□□□□□ -1.32
LRCH3-212ENST00000466845 DYTNA2CJ06 578 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 C9IYK1 514 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 SHOXO15266 292 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 MPOP05164 745 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 RBP3P10745 1247 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 CFPP27918 469 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 CASQ1P31415 396 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 CTSKP43235 329 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 ERVFRD-1P60508 538 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 POU4F1Q01851 419 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 WASHC5Q12768 1159 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 VPS72Q15906 364 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 NFE2L2Q16236 605 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 FBLN7Q53RD9 439 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 CCDC93Q567U6 631 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 ODR4Q5SWX8 454 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 CCDC70Q6NSX1 233 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 CATIPQ7Z7H3 387 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 ZNF605Q86T29 641 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 TTC30AQ86WT1 665 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 LMNTD2Q8IXW0 634 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 LRRC56Q8IYG6 542 aaPredicted RBP6.78□□□□□ -1.32
LRCH3-212ENST00000466845 KIAA1958Q8N8K9 716 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 GOLGA1Q92805 767 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 APBA2Q99767 749 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 IER2Q9BTL4 223 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 C22orf23Q9BZE7 217 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 MCOLN1Q9GZU1 580 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 CHST12Q9NRB3 414 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 ERVK13-1Q9NX77 482 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 ACSL6Q9UKU0 697 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 ACAD8Q9UKU7 415 aa6.78□□□□□ -1.32
LRCH3-212ENST00000466845 SMG5Q9UPR3 1016 aaKnown RBP6.78□□□□□ -1.32
LRCH3-212ENST00000466845 THRAP3Q9Y2W1 955 aaKnown RBP6.78□□□□□ -1.32
LRCH3-212ENST00000466845 FHAD1B1AJZ9 1412 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 IPO5O00410 1097 aaKnown RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 PES1O00541 588 aaKnown RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 RNASEH2AO75792 299 aaKnown RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 KCNA2P16389 499 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 CASP7P55210 303 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 ZNF445P59923 1031 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 YBX1P67809 324 aaKnown RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 HMGN5P82970 282 aaKnown RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 HSF5Q4G112 596 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 SYCP2LQ5T4T6 812 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 CIAPIN1Q6FI81 312 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 SMAP1Q8IYB5 467 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 CHPFQ8IZ52 775 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 FRS2Q8WU20 508 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 CPLX3Q8WVH0 158 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 GBP3Q9H0R5 595 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 SUDS3Q9H7L9 328 aaPredicted RBP6.77□□□□□ -1.33
LRCH3-212ENST00000466845 WHRNQ9P202 907 aa6.77□□□□□ -1.33
LRCH3-212ENST00000466845 MEIS1O00470 390 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 HSP90AB1P08238 724 aaKnown RBP6.76□□□□□ -1.33
LRCH3-212ENST00000466845 DLG4P78352 724 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 SLC7A5Q01650 507 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 GNPTABQ3T906 1256 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 ADGRF1Q5T601 910 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 PDXDC1Q6P996 788 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 SLCO6A1Q86UG4 719 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 VPS37DQ86XT2 251 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 RAVER1Q8IY67 606 aaKnown RBP6.76□□□□□ -1.33
LRCH3-212ENST00000466845 SAMD3Q8N6K7 520 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 PAF1Q8N7H5 531 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 NAT16Q8N8M0 369 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 CCDC89Q8N998 374 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 TSR2Q969E8 191 aaKnown RBP6.76□□□□□ -1.33
LRCH3-212ENST00000466845 ERP27Q96DN0 273 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 TTC14Q96N46 770 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 SLC12A9Q9BXP2 914 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 OSBPL2Q9H1P3 480 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 AS3MTQ9HBK9 375 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 TYW1Q9NV66 732 aaKnown RBP6.76□□□□□ -1.33
LRCH3-212ENST00000466845 SIRT5Q9NXA8 310 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 EID1Q9Y6B2 187 aa6.76□□□□□ -1.33
LRCH3-212ENST00000466845 CEP170Q5SW79 1584 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 A0A1W2PQ27 194 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 A0A1W2PQ64 194 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 A0A1W2PQC6 194 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 A0A1W2PQD8 194 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 PABPN1LA6NDY0 278 aaKnown RBP6.75□□□□□ -1.33
LRCH3-212ENST00000466845 FAM86C2PA6NEL3 165 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 NPIPB6E9PJ23 425 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 PPM1BO75688 479 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 TBC1D8O95759 1140 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms