RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 BRD3Q15059 726 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 CENPPQ6IPU0 288 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 POTEGQ6S5H5 508 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 POTEEQ6S8J3 1075 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 SECISBP2LQ93073 1101 aaKnown RBP18.14■□□□□ 0.49
SLX4-202ENST00000466154 HOXA10P31260 410 aaPredicted RBP18.14■□□□□ 0.49
SLX4-202ENST00000466154 NT5C2P49902 561 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.49
SLX4-202ENST00000466154 FAM26FQ5R3K3 315 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 TMC4Q7Z404 712 aa18.14■□□□□ 0.49
SLX4-202ENST00000466154 C2orf54Q08AI8 447 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.13■□□□□ 0.49
SLX4-202ENST00000466154 MYO1AQ9UBC5 1043 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 MYH1P12882 1939 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 LMAN1P49257 510 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 PABPC4Q13310 644 aaKnown RBP eCLIP18.13■□□□□ 0.49
SLX4-202ENST00000466154 TTYH3Q9C0H2 523 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 ARHGAP20Q9P2F6 1191 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 ZNF263O14978 683 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 KIF11P52732 1056 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 GFPT1Q06210 699 aaPredicted RBP18.13■□□□□ 0.49
SLX4-202ENST00000466154 MAN2A1Q16706 1144 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 SKIDA1Q1XH10 827 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 GPATCH4Q5T3I0 446 aaKnown RBP18.13■□□□□ 0.49
SLX4-202ENST00000466154 PLCD3Q8N3E9 789 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 SWAP70Q9UH65 585 aa18.13■□□□□ 0.49
SLX4-202ENST00000466154 USO1O60763 962 aaKnown RBP18.12■□□□□ 0.49
SLX4-202ENST00000466154 PTPROQ16827 1216 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 BEND6Q5SZJ8 279 aaPredicted RBP18.12■□□□□ 0.49
SLX4-202ENST00000466154 HDXQ7Z353 690 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 EHD2Q9NZN4 543 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 PLA2G4BP0C869 781 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 HSPA1LP34931 641 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 AMPD2Q01433 879 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 RASSF7Q02833 373 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 ICA1Q05084 483 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 ZYXQ15942 572 aaKnown RBP18.12■□□□□ 0.49
SLX4-202ENST00000466154 KRT27Q7Z3Y8 459 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 ANO3Q9BYT9 981 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 CAPN6Q9Y6Q1 641 aa18.12■□□□□ 0.49
SLX4-202ENST00000466154 NCK2O43639 380 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 FGFR1OPO95684 399 aaKnown RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 ZNF76P36508 570 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 UBXN2AP68543 259 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 TRAPPC11Q7Z392 1133 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 COL23A1Q86Y22 540 aaPredicted RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 PROM2Q8N271 834 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 GUF1Q8N442 669 aaKnown RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 TDRD3Q9H7E2 651 aaKnown RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 PCDHA13Q9Y5I0 950 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 PVALEFA0A1B0GWK0 134 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 RNASE9P60153 205 aaKnown RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 POLR2FP61218 127 aaKnown RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 GPS2Q13227 327 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 MEA1Q16626 185 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 TRMT1LQ7Z2T5 733 aaKnown RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 POTEB2H3BUK9 544 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 CHMP2AO43633 222 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 SNHG28P0DPA3 235 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 PDIA5Q14554 519 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
SLX4-202ENST00000466154 LSM14BQ9BX40 385 aaKnown RBP18.11■□□□□ 0.49
SLX4-202ENST00000466154 EIF3CLB5ME19 914 aaKnown RBP18.1■□□□□ 0.49
SLX4-202ENST00000466154 hCG_1984214I3L0E3 225 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 PSMD14O00487 310 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 MAGEA1P43355 309 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 RAPGEF1Q13905 1077 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 HSP90B2PQ58FF3 399 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 ZNF713Q8N859 430 aaPredicted RBP18.1■□□□□ 0.49
SLX4-202ENST00000466154 ERGIC2Q96RQ1 377 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 EIF3CQ99613 913 aaKnown RBP18.1■□□□□ 0.49
SLX4-202ENST00000466154 IGKV6D-41A0A0C4DH26 115 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 NPR1P16066 1061 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 PPP1R2P41236 205 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 VAV2P52735 878 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 CASP8Q14790 479 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 TCERG1LQ5VWI1 586 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 EHBP1Q8NDI1 1231 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 MED24O75448 989 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 PSMC6P62333 389 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 TUBB2AQ13885 445 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 DNAAF5Q86Y56 855 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 CCDC170Q8IYT3 715 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 TUBB2BQ9BVA1 445 aa18.1■□□□□ 0.49
SLX4-202ENST00000466154 SFI1A8K8P3 1242 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 PDE2AO00408 941 aaPredicted RBP18.09■□□□□ 0.49
SLX4-202ENST00000466154 TACC1O75410 805 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 CCDC181Q5TID7 509 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 NFRKBQ6P4R8 1299 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 CYP2W1Q8TAV3 490 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 SIK3Q9Y2K2 1263 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.09■□□□□ 0.49
SLX4-202ENST00000466154 COL4A3BPQ9Y5P4 624 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 SPATA31A6Q5VVP1 1343 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 SPDYE3A6NKU9 549 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 F5H6K3 240 aa18.09■□□□□ 0.49
SLX4-202ENST00000466154 ALDH1B1P30837 517 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms