RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 PSEN2P49810 448 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 PTPN11Q06124 597 aaPredicted RBP16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 PTGISQ16647 500 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 APOA5Q6Q788 366 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 TIFAQ96CG3 184 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 TELO2Q9Y4R8 837 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 PIK3CDO00329 1044 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 IQCF3P0C7M6 154 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 HOXD8P13378 290 aaPredicted RBP16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 HIC1Q14526 733 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 MFSD10Q14728 455 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 GRIN2CQ14957 1233 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 TSGA10IPQ3SY00 556 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 DHX32Q7L7V1 743 aaKnown RBP16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 SESTD1Q86VW0 696 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 DHX38Q92620 1227 aaKnown RBP16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 INPP4AQ96PE3 977 aaPredicted RBP16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 NOD1Q9Y239 953 aa16.2■□□□□ 0.18
CACNA1C-224ENST00000465934 CHD7Q9P2D1 2997 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 HAS3O00219 553 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 ZNF200P98182 395 aaPredicted RBP16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 UBE2SQ16763 222 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 KCNV1Q6PIU1 500 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 HEATR3Q7Z4Q2 680 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 RPUSD2Q8IZ73 545 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 CUL5Q93034 780 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 PSTPIP2Q9H939 334 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 GTF2IRD1Q9UHL9 959 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
CACNA1C-224ENST00000465934 TMEM265A0A087WTH1 108 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 SPATA31C2B4DYI2 1134 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 TGFB3P10600 412 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 ICAM3P32942 547 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 RABGGTBP53611 331 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 FUT2Q10981 343 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 WNT8BQ93098 351 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 C16orf70Q9BSU1 422 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 ZNF576Q9H609 170 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 MLXIPQ9HAP2 919 aa16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 YBX2Q9Y2T7 364 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-224ENST00000465934 KIAA1217Q5T5P2 1943 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 KLF18A0A0U1RQI7 1052 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 ZBBXA8MT70 800 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 ZBTB43O43298 467 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 PPFIA4O75335 1185 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 BFSP2Q13515 415 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 GPNMBQ14956 572 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 RTN1Q16799 776 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 GNPTABQ3T906 1256 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 PCNX4Q63HM2 1172 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 WWC2Q6AWC2 1192 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 TYW1BQ6NUM6 668 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 SYNE3Q6ZMZ3 975 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 CYFIP1Q7L576 1253 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 RETREG2Q8NC44 543 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 MTIF3Q9H2K0 278 aaKnown RBP16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 SLC4A7Q9Y6M7 1214 aa16.17■□□□□ 0.18
CACNA1C-224ENST00000465934 FIBPO43427 364 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 STAM2O75886 525 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 PFKMP08237 780 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 MYOGP15173 224 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 FOSL2P15408 326 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 CDC27P30260 824 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 SP4Q02446 784 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 KRT32Q14532 448 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 METTL7BQ6UX53 244 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 TRIM50Q86XT4 487 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 MAFAQ8NHW3 353 aaPredicted RBP16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 KCNB2Q92953 911 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 JAKMIP1Q96N16 626 aaKnown RBP16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 NKX2-4Q9H2Z4 354 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 RBM28Q9NW13 759 aaKnown RBP16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
CACNA1C-224ENST00000465934 GOLGA8AA7E2F4 631 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 NOP56O00567 594 aaKnown RBP16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 LGALS2P05162 132 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 CKBP12277 381 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 ATP2A2P16615 1042 aaKnown RBP16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 ITGB5P18084 799 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 HSPA4P34932 840 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 RFC2P35250 354 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 TRIM71Q2Q1W2 868 aaKnown RBP16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 LRRC8DQ7L1W4 858 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 CAGE1Q8TC20 777 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 AFAP1L1Q8TED9 768 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 GPR20Q99678 358 aa16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 FTOQ9C0B1 505 aaKnown RBP eCLIP16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 V9GY48 417 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-224ENST00000465934 VCANP13611 3396 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms