RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 INCENPQ9NQS7 918 aa11.49□□□□□ -0.57
USP39-212ENST00000465514 KIAA1671Q9BY89 1806 aa11.49□□□□□ -0.57
USP39-212ENST00000465514 RBM47A0AV96 593 aaKnown RBP11.48□□□□□ -0.57
USP39-212ENST00000465514 A6NJR5 290 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 LOC730098B7Z3J9 87 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 FOXP2O15409 715 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 LINC01565O15544 149 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 KPNA6O60684 536 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 MX1P20591 662 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 GTF2F1P35269 517 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP39-212ENST00000465514 NBL1P41271 181 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 SLC1A4P43007 532 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 MBTPS1Q14703 1052 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 PPP2R5BQ15173 497 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 TKFCQ3LXA3 575 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 NSMFQ6X4W1 530 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 FAM160B2Q86V87 743 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 COPS5Q92905 334 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 YME1L1Q96TA2 773 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP39-212ENST00000465514 KIAA1217Q5T5P2 1943 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 CEP250Q9BV73 2442 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 CHD6Q8TD26 2715 aa11.48□□□□□ -0.57
USP39-212ENST00000465514 TSPY2A6NKD2 308 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 GALR2O43603 387 aaPredicted RBP11.47□□□□□ -0.57
USP39-212ENST00000465514 NMT2O60551 498 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 CSPG5O95196 566 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 ALDH5A1P51649 535 aaPredicted RBP11.47□□□□□ -0.57
USP39-212ENST00000465514 SNAP25P60880 206 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 RCSD1Q6JBY9 416 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 KCTD1Q719H9 257 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 ADSSL1Q8N142 457 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 IGFLR1Q9H665 355 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 STX8Q9UNK0 236 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 MAP1BP46821 2468 aaKnown RBP11.47□□□□□ -0.57
USP39-212ENST00000465514 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
USP39-212ENST00000465514 SALL3Q9BXA9 1300 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 NKRFO15226 690 aaKnown RBP eCLIP11.46□□□□□ -0.57
USP39-212ENST00000465514 RANBP6O60518 1105 aaKnown RBP11.46□□□□□ -0.57
USP39-212ENST00000465514 PLA2G6O60733 806 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 LGR5O75473 907 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.57
USP39-212ENST00000465514 CTNNB1P35222 781 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 NDUFV1P49821 464 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 CBX2Q14781 532 aaPredicted RBP11.46□□□□□ -0.57
USP39-212ENST00000465514 ZNF618Q5T7W0 954 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 ANKRD45Q5TZF3 282 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 VPS53Q5VIR6 699 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 RASGRP2Q7LDG7 609 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 FRMD5Q7Z6J6 570 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 SESTD1Q86VW0 696 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 WNT8BQ93098 351 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 MSLNLQ96KJ4 702 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 PRR12Q9ULL5 1215 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 MTMR7Q9Y216 660 aa11.46□□□□□ -0.57
USP39-212ENST00000465514 GRM6O15303 877 aa11.45□□□□□ -0.58
USP39-212ENST00000465514 UPP2O95045 317 aa11.45□□□□□ -0.58
USP39-212ENST00000465514 EYA4O95677 639 aa11.45□□□□□ -0.58
USP39-212ENST00000465514 NUBP1P53384 320 aa11.45□□□□□ -0.58
USP39-212ENST00000465514 SMRP1Q8NCR6 262 aa11.45□□□□□ -0.58
USP39-212ENST00000465514 NKD2Q969F2 451 aaPredicted RBP11.45□□□□□ -0.58
USP39-212ENST00000465514 ADD3Q9UEY8 706 aaKnown RBP11.45□□□□□ -0.58
USP39-212ENST00000465514 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
USP39-212ENST00000465514 ANAPC4Q9UJX5 808 aa11.45□□□□□ -0.58
USP39-212ENST00000465514 SPTBN2O15020 2390 aa11.45□□□□□ -0.58
USP39-212ENST00000465514 MYO10Q9HD67 2058 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 ORC4O43929 436 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 NOVP48745 357 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
USP39-212ENST00000465514 ALX1Q15699 326 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 CCDC96Q2M329 555 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 TRIM71Q2Q1W2 868 aaKnown RBP11.44□□□□□ -0.58
USP39-212ENST00000465514 DBF4BQ8NFT6 615 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 SCFD2Q8WU76 684 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 KAT2BQ92831 832 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 EVI5LQ96CN4 794 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 HELLSQ9NRZ9 838 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 GTF2IRD1Q9UHL9 959 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
USP39-212ENST00000465514 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 ARIH2O95376 493 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 MMP3P08254 477 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 FGRP09769 529 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 TXNP10599 105 aaKnown RBP11.43□□□□□ -0.58
USP39-212ENST00000465514 SLC16A2P36021 539 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 PDE1AP54750 535 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 RRP1P56182 461 aaKnown RBP11.43□□□□□ -0.58
USP39-212ENST00000465514 PDE4DQ08499 809 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 PTK7Q13308 1070 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 ADAM15Q13444 863 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 TTBK2Q6IQ55 1244 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 DGLUCYQ7Z3D6 616 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms