RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 TMEM232C9JQI7 657 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 ADCY3O60266 1144 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 NEMFO60524 1076 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 USP2O75604 605 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-205ENST00000465408 TDP2O95551 362 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 BMP3P12645 472 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 TXLNAP40222 546 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 GTF2A2P52657 109 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 MYL5Q02045 173 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 DPYDQ12882 1025 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 KARSQ15046 597 aaKnown RBP9.36□□□□□ -0.91
UBE4B-205ENST00000465408 CCDC144BQ3MJ40 725 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 NT5DC1Q5TFE4 455 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 SYDE2Q5VT97 1194 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 MIGA2Q7L4E1 593 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 POTEDQ86YR6 584 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 TRMT44Q8IYL2 757 aaKnown RBP9.36□□□□□ -0.91
UBE4B-205ENST00000465408 ANKRD13AQ8IZ07 590 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 SPICE1Q8N0Z3 855 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-205ENST00000465408 MTMR14Q8NCE2 650 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 GMCL1P1Q8NEA9 526 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 RASSF8Q8NHQ8 419 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 CCDC34Q96HJ3 373 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 ZBED3Q96IU2 234 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-205ENST00000465408 FBXL18Q96ME1 805 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 DEFB129Q9H1M3 183 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 IFNKQ9P0W0 207 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
UBE4B-205ENST00000465408 ZBTB21Q9ULJ3 1066 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 PYCARDQ9ULZ3 195 aa9.36□□□□□ -0.91
UBE4B-205ENST00000465408 MYH8P13535 1937 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 BTBD19C9JJ37 291 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 LAD1O00515 517 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 IKBKBO14920 756 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 GTPBP6O43824 516 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-205ENST00000465408 SLC37A4O43826 429 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 EDIL3O43854 480 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 ZNF500O60304 480 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-205ENST00000465408 TPM3P06753 285 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 STAT6P42226 847 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 IREB2P48200 963 aaKnown RBP9.35□□□□□ -0.91
UBE4B-205ENST00000465408 CUL4BQ13620 913 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 CCDC85BQ15834 202 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-205ENST00000465408 LRRC26Q2I0M4 334 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 KIAA1755Q5JYT7 1200 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 CCDC84Q86UT8 332 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-205ENST00000465408 IQUBQ8NA54 791 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 CUL5Q93034 780 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 GMCL1Q96IK5 515 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 LBHD1Q9BQE6 289 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-205ENST00000465408 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.35□□□□□ -0.91
UBE4B-205ENST00000465408 HSD3B7Q9H2F3 369 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 ARHGEF10LQ9HCE6 1279 aa9.35□□□□□ -0.91
UBE4B-205ENST00000465408 MYO1BO43795 1136 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
UBE4B-205ENST00000465408 PRPHP41219 470 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 UBA7P41226 1012 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
UBE4B-205ENST00000465408 KCNQ1P51787 676 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 MRPL12P52815 198 aaKnown RBP9.34□□□□□ -0.91
UBE4B-205ENST00000465408 FANCCQ00597 558 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 LRMPQ12912 555 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 ARID5BQ14865 1188 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
UBE4B-205ENST00000465408 CALCRLQ16602 461 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 USH1GQ495M9 461 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 HSP90AA4PQ58FG1 418 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 FAM83BQ5T0W9 1011 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 FKBP1CQ5VVH2 108 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 FAM83AQ86UY5 434 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 CABP7Q86V35 215 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 SMYD4Q8IYR2 804 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-205ENST00000465408 TRIML1Q8N9V2 468 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 MLKLQ8NB16 471 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 SPATA20Q8TB22 786 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 LRRC15Q8TF66 581 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 MTRQ99707 1265 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 PYM1Q9BRP8 204 aaKnown RBP9.34□□□□□ -0.91
UBE4B-205ENST00000465408 XPO4Q9C0E2 1151 aaKnown RBP9.34□□□□□ -0.91
UBE4B-205ENST00000465408 PSTPIP2Q9H939 334 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 DISC1Q9NRI5 854 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 FANCLQ9NW38 375 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 PCDHA1Q9Y5I3 950 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 DCHS1Q96JQ0 3298 aa9.34□□□□□ -0.91
UBE4B-205ENST00000465408 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 COBLO75128 1261 aa9.33□□□□□ -0.92
UBE4B-205ENST00000465408 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms