RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	27.76	■■■□□ 2.03	6e-9	■■■■■ 50.5
RERE-208	ENST00000465125	UNC93B1	Q9H1C4	597 aa		27.76	■■■□□ 2.03
RERE-208	ENST00000465125	DDX25	Q9UHL0	483 aa	Known RBP	27.76	■■■□□ 2.03
RERE-208	ENST00000465125	SPATA31C2	B4DYI2	1134 aa		27.75	■■■□□ 2.03
RERE-208	ENST00000465125	TXN	P10599	105 aa	Known RBP	27.75	■■■□□ 2.03
RERE-208	ENST00000465125	CCL5	P13501	91 aa		27.75	■■■□□ 2.03
RERE-208	ENST00000465125	SEMA3F	Q13275	785 aa		27.75	■■■□□ 2.03
RERE-208	ENST00000465125		Q4G0T1	1027 aa		27.75	■■■□□ 2.03
RERE-208	ENST00000465125	TTC38	Q5R3I4	469 aa		27.75	■■■□□ 2.03
RERE-208	ENST00000465125	MBOAT7	Q96N66	472 aa		27.75	■■■□□ 2.03
RERE-208	ENST00000465125	KCNH7	Q9NS40	1196 aa		27.75	■■■□□ 2.03
RERE-208	ENST00000465125	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.74	■■■□□ 2.03
RERE-208	ENST00000465125	MAFG	O15525	162 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	ARIH2	O95376	493 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	BRD1	O95696	1058 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	F13A1	P00488	732 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	TGFB3	P10600	412 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	DDIT3	P35638	169 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	MTFR1	Q15390	333 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	MYSM1	Q5VVJ2	828 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	CCDC62	Q6P9F0	684 aa		27.74	■■■□□ 2.03
RERE-208	ENST00000465125	DDX20	Q9UHI6	824 aa	Known RBP	27.74	■■■□□ 2.03
RERE-208	ENST00000465125	WNT7A	O00755	349 aa		27.73	■■■□□ 2.03
RERE-208	ENST00000465125	MSC	O60682	206 aa		27.73	■■■□□ 2.03
RERE-208	ENST00000465125	AR	P10275	920 aa		27.73	■■■□□ 2.03
RERE-208	ENST00000465125	SMPD1	P17405	629 aa		27.73	■■■□□ 2.03
RERE-208	ENST00000465125	DUSP28	Q4G0W2	176 aa		27.73	■■■□□ 2.03
RERE-208	ENST00000465125	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.73	■■■□□ 2.03
RERE-208	ENST00000465125	LENG9	Q96B70	501 aa		27.73	■■■□□ 2.03
RERE-208	ENST00000465125	RNF208	Q9H0X6	261 aa		27.73	■■■□□ 2.03
RERE-208	ENST00000465125	DDX41	Q9UJV9	622 aa	Known RBP	27.73	■■■□□ 2.03
RERE-208	ENST00000465125	NKRF	O15226	690 aa	Known RBP eCLIP	27.72	■■■□□ 2.03	1e-6	■■■■□ 22.3
RERE-208	ENST00000465125	ADCY6	O43306	1168 aa		27.72	■■■□□ 2.03
RERE-208	ENST00000465125	SLC37A4	O43826	429 aa		27.72	■■■□□ 2.03
RERE-208	ENST00000465125	RARB	P10826	455 aa		27.72	■■■□□ 2.03
RERE-208	ENST00000465125	UBA1	P22314	1058 aa	Known RBP	27.72	■■■□□ 2.03
RERE-208	ENST00000465125	TOB1	P50616	345 aa	Predicted RBP	27.72	■■■□□ 2.03
RERE-208	ENST00000465125	NUCB2	P80303	420 aa		27.72	■■■□□ 2.03
RERE-208	ENST00000465125	ORC2	Q13416	577 aa	Predicted RBP	27.72	■■■□□ 2.03
RERE-208	ENST00000465125	LY6K	Q17RY6	165 aa		27.72	■■■□□ 2.03
RERE-208	ENST00000465125	LENG1	Q96BZ8	264 aa	Predicted RBP	27.72	■■■□□ 2.03
RERE-208	ENST00000465125	AGO4	Q9HCK5	861 aa	Known RBP	27.72	■■■□□ 2.03
RERE-208	ENST00000465125	PKD2L1	Q9P0L9	805 aa		27.72	■■■□□ 2.03
RERE-208	ENST00000465125	NEMF	O60524	1076 aa		27.71	■■■□□ 2.03
RERE-208	ENST00000465125	MCM7	P33993	719 aa		27.71	■■■□□ 2.03
RERE-208	ENST00000465125	NBR1	Q14596	966 aa		27.71	■■■□□ 2.03
RERE-208	ENST00000465125	ZNF174	Q15697	407 aa		27.71	■■■□□ 2.03
RERE-208	ENST00000465125	ANO1	Q5XXA6	986 aa		27.71	■■■□□ 2.03
RERE-208	ENST00000465125	ZNF577	Q9BSK1	485 aa		27.71	■■■□□ 2.03
RERE-208	ENST00000465125	PAK6	Q9NQU5	681 aa	Predicted RBP	27.71	■■■□□ 2.03
RERE-208	ENST00000465125	CIZ1	Q9ULV3	898 aa	Predicted RBP	27.71	■■■□□ 2.03
RERE-208	ENST00000465125	MSH4	O15457	936 aa		27.7	■■■□□ 2.02
RERE-208	ENST00000465125	DUSP11	O75319	330 aa	Known RBP	27.7	■■■□□ 2.02
RERE-208	ENST00000465125	NEDD9	Q14511	834 aa		27.7	■■■□□ 2.02
RERE-208	ENST00000465125	TMEM63B	Q5T3F8	832 aa		27.7	■■■□□ 2.02
RERE-208	ENST00000465125	GJC2	Q5T442	439 aa	Predicted RBP	27.7	■■■□□ 2.02
RERE-208	ENST00000465125	POTED	Q86YR6	584 aa		27.7	■■■□□ 2.02
RERE-208	ENST00000465125	GIMAP8	Q8ND71	665 aa	Predicted RBP	27.7	■■■□□ 2.02
RERE-208	ENST00000465125	SENP7	Q9BQF6	1050 aa		27.7	■■■□□ 2.02
RERE-208	ENST00000465125	GNE	Q9Y223	722 aa	Known RBP	27.7	■■■□□ 2.02
RERE-208	ENST00000465125	ZDHHC9	Q9Y397	364 aa		27.7	■■■□□ 2.02
RERE-208	ENST00000465125	PCDHB6	Q9Y5E3	794 aa		27.7	■■■□□ 2.02
RERE-208	ENST00000465125	IPO5	O00410	1097 aa	Known RBP	27.69	■■■□□ 2.02
RERE-208	ENST00000465125	GGPS1	O95749	300 aa		27.69	■■■□□ 2.02
RERE-208	ENST00000465125	GH1	P01241	217 aa		27.69	■■■□□ 2.02
RERE-208	ENST00000465125	KCNA2	P16389	499 aa		27.69	■■■□□ 2.02
RERE-208	ENST00000465125	SP2	Q02086	613 aa		27.69	■■■□□ 2.02
RERE-208	ENST00000465125	FAM173B	Q6P4H8	233 aa		27.69	■■■□□ 2.02
RERE-208	ENST00000465125	TLK2	Q86UE8	772 aa		27.69	■■■□□ 2.02
RERE-208	ENST00000465125	DHX37	Q8IY37	1157 aa	Known RBP	27.69	■■■□□ 2.02
RERE-208	ENST00000465125	COPS5	Q92905	334 aa		27.69	■■■□□ 2.02
RERE-208	ENST00000465125	MARCH6	O60337	910 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	ATP9A	O75110	1047 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	CALCRL	Q16602	461 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	OR6J1	Q8NGC5	347 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	ETNPPL	Q8TBG4	499 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	UIMC1	Q96RL1	719 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	SDF4	Q9BRK5	362 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	AP5M1	Q9H0R1	490 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125		Q9Y3F1	56 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	MYH15	Q9Y2K3	1946 aa		27.68	■■■□□ 2.02
RERE-208	ENST00000465125	TBX3	O15119	743 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	SORBS3	O60504	671 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	ARHGAP1	Q07960	439 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	ITGB3BP	Q13352	177 aa	Predicted RBP	27.67	■■■□□ 2.02
RERE-208	ENST00000465125	CELF3	Q5SZQ8	465 aa	Known RBP	27.67	■■■□□ 2.02
RERE-208	ENST00000465125	DEFB118	Q96PH6	123 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	MLXIP	Q9HAP2	919 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	SPC25	Q9HBM1	224 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	KCNMB3	Q9NPA1	279 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	XPNPEP3	Q9NQH7	507 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	27.67	■■■□□ 2.02
RERE-208	ENST00000465125	FRMPD3	Q5JV73	1810 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	NFASC	O94856	1347 aa		27.67	■■■□□ 2.02
RERE-208	ENST00000465125	CENPF	P49454	3210 aa		27.66	■■■□□ 2.02
RERE-208	ENST00000465125	DYNC1LI2	O43237	492 aa	Predicted RBP	27.66	■■■□□ 2.02
RERE-208	ENST00000465125	BAG4	O95429	457 aa	Known RBP	27.66	■■■□□ 2.02
RERE-208	ENST00000465125	PTGS1	P23219	599 aa		27.66	■■■□□ 2.02
RERE-208	ENST00000465125	LHX8	Q68G74	356 aa		27.66	■■■□□ 2.02
RERE-208	ENST00000465125	CYFIP1	Q7L576	1253 aa		27.66	■■■□□ 2.02

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