RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 GTF2IRD1Q9UHL9 959 aa17.85■□□□□ 0.45
HOXB3-204ENST00000465120 TRIP12Q14669 1992 aaPredicted RBP17.84■□□□□ 0.45
HOXB3-204ENST00000465120 PRUNE2Q8WUY3 3088 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 KIF28PB7ZC32 967 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 DDAH1O94760 285 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 SELPP16109 830 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 KCNJ6P48051 423 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 HSDL1Q3SXM5 330 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 GNPTABQ3T906 1256 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 LRRC8DQ7L1W4 858 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 USP38Q8NB14 1042 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 SLC9A7Q96T83 725 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 LSG1Q9H089 658 aaKnown RBP17.84■□□□□ 0.45
HOXB3-204ENST00000465120 ANO2Q9NQ90 1003 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 RTEL1Q9NZ71 1219 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 CUL9Q8IWT3 2517 aa17.84■□□□□ 0.45
HOXB3-204ENST00000465120 NOP56O00567 594 aaKnown RBP17.83■□□□□ 0.44
HOXB3-204ENST00000465120 SLC27A2O14975 620 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 F2P00734 622 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 UBA1P22314 1058 aaKnown RBP17.83■□□□□ 0.44
HOXB3-204ENST00000465120 GNAQP50148 359 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 SP2Q02086 613 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 GPKOWQ92917 476 aaPredicted RBP eCLIP17.83■□□□□ 0.449e-6■■□□□ 14.5
HOXB3-204ENST00000465120 TMEM87BQ96K49 555 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 MAP3K14Q99558 947 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 LZTS2Q9BRK4 669 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 SPZ1Q9BXG8 430 aa17.83■□□□□ 0.44
HOXB3-204ENST00000465120 SH2B2O14492 632 aaPredicted RBP17.82■□□□□ 0.44
HOXB3-204ENST00000465120 CA3P07451 260 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 CKBP12277 381 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 RXRAP19793 462 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 PTK7Q13308 1070 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 ADGRE1Q14246 886 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 USP17L6PQ6QN14 398 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 RAB11FIP4Q86YS3 637 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 CMTR1Q8N1G2 835 aaKnown RBP17.82■□□□□ 0.44
HOXB3-204ENST00000465120 MICALL1Q8N3F8 863 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 PHOSPHO2Q8TCD6 241 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 DHX38Q92620 1227 aaKnown RBP17.82■□□□□ 0.44
HOXB3-204ENST00000465120 MTA3Q9BTC8 594 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 CERS4Q9HA82 394 aa17.82■□□□□ 0.44
HOXB3-204ENST00000465120 HAS3O00219 553 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 STAM2O75886 525 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 BAIAP3O94812 1187 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 PLEKHA8P1O95397 391 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 PARNO95453 639 aaKnown RBP17.81■□□□□ 0.44
HOXB3-204ENST00000465120 CALM1P0DP23 149 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 CALM2P0DP24 149 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 CALM3P0DP25 149 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 ZNF200P98182 395 aaPredicted RBP17.81■□□□□ 0.44
HOXB3-204ENST00000465120 NEDD9Q14511 834 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 CYFIP1Q7L576 1253 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 HERC6Q8IVU3 1022 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 CCDC82Q8N4S0 544 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 SYMPKQ92797 1274 aaKnown RBP17.81■□□□□ 0.44
HOXB3-204ENST00000465120 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 ZBED2Q9BTP6 218 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 PRDM6Q9NQX0 595 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 TANC1Q9C0D5 1861 aa17.81■□□□□ 0.44
HOXB3-204ENST00000465120 CHD9Q3L8U1 2897 aa17.8■□□□□ 0.44
HOXB3-204ENST00000465120 SMARCA1P28370 1054 aa17.8■□□□□ 0.44
HOXB3-204ENST00000465120 MRPS9P82933 396 aaKnown RBP17.8■□□□□ 0.44
HOXB3-204ENST00000465120 SYNE3Q6ZMZ3 975 aa17.8■□□□□ 0.44
HOXB3-204ENST00000465120 SRBD1Q8N5C6 995 aaKnown RBP17.8■□□□□ 0.44
HOXB3-204ENST00000465120 BCAS3Q9H6U6 928 aa17.8■□□□□ 0.44
HOXB3-204ENST00000465120 hCG_1642624A0A1W2PR95 340 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 C17orf102A2RUQ5 167 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 H3BRB1 525 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 FIBPO43427 364 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 TLL1O43897 1013 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 HOXD8P13378 290 aaPredicted RBP17.79■□□□□ 0.44
HOXB3-204ENST00000465120 LIFRP42702 1097 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 SP4Q02446 784 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 NECTIN1Q15223 517 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 ZNF618Q5T7W0 954 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 CNKSR3Q6P9H4 555 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 NLRX1Q86UT6 975 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 C16orf70Q9BSU1 422 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 TUT1Q9H6E5 874 aaKnown RBP17.79■□□□□ 0.44
HOXB3-204ENST00000465120 PSTPIP2Q9H939 334 aa17.79■□□□□ 0.44
HOXB3-204ENST00000465120 TET1Q8NFU7 2136 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 SPATA31C2B4DYI2 1134 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 RFXAPO00287 272 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 NBNO60934 754 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 LGALS2P05162 132 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 ICAM3P32942 547 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 THPOP40225 353 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 WDR5P61964 334 aaKnown RBP17.78■□□□□ 0.44
HOXB3-204ENST00000465120 IKBKEQ14164 716 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 TJAP1Q5JTD0 557 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 UTP14CQ5TAP6 766 aaKnown RBP17.78■□□□□ 0.44
HOXB3-204ENST00000465120 SKAP1Q86WV1 359 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 ARNTL2Q8WYA1 636 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 ATP6V0A1Q93050 837 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 INPP4AQ96PE3 977 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms