RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	LETM2	Q2VYF4	491 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	TAPT1	Q6NXT6	567 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	CLEC17A	Q6ZS10	378 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	UBE2Q1	Q7Z7E8	422 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	NEK8	Q86SG6	692 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	RNF180	Q86T96	592 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	FBXO16	Q8IX29	292 aa	Predicted RBP	14	□□□□□ -0.17
PTPN7-205	ENST00000464870	GBP4	Q96PP9	640 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	HTATIP2	Q9BUP3	242 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	MRVI1	Q9Y6F6	885 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	TCHH	Q07283	1943 aa		14	□□□□□ -0.17
PTPN7-205	ENST00000464870	DNM1L	O00429	736 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	TDP2	O95551	362 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	PGK1	P00558	417 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	MCM7	P33993	719 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	SREBF1	P36956	1147 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	ADCYAP1R1	P41586	468 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	ARHGAP4	P98171	946 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	LRRC41	Q15345	812 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	TPRN	Q4KMQ1	711 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	GJC2	Q5T442	439 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	MCTP2	Q6DN12	878 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	TEX2	Q8IWB9	1127 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	IL31RA	Q8NI17	732 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	DIS3L	Q8TF46	1054 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	LEO1	Q8WVC0	666 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	C11orf49	Q9H6J7	331 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	PDGFC	Q9NRA1	345 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	RTEL1	Q9NZ71	1219 aa		13.99	□□□□□ -0.17
PTPN7-205	ENST00000464870	CCNT1	O60563	726 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	EIF3J	O75822	258 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	MYCL	P12524	364 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	TRAPPC10	P48553	1259 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	NASP	P49321	788 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	MNX1	P50219	401 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	STK38	Q15208	465 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	PTPA	Q15257	358 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	ATL3	Q6DD88	541 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	LINC00301	Q8NCQ3	95 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	SCFD2	Q8WU76	684 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	CRYGN	Q8WXF5	182 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	LENG1	Q96BZ8	264 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	SPATA32	Q96LK8	384 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	UIMC1	Q96RL1	719 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	PDCD2L	Q9BRP1	358 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	WDR11	Q9BZH6	1224 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	AP5M1	Q9H0R1	490 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	RCOR1	Q9UKL0	485 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	CFAP45	Q9UL16	551 aa		13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-205	ENST00000464870	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	RBM47	A0AV96	593 aa	Known RBP	13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	DYNC1LI2	O43237	492 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	PRPF40A	O75400	957 aa	Known RBP	13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	C6orf222	P0C671	652 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	SMPD1	P17405	629 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	MARCKS	P29966	332 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	CCND2	P30279	289 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	MCM4	P33991	863 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	GJA9	P57773	515 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	TTLL4	Q14679	1199 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	PGM5	Q15124	567 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	DUSP28	Q4G0W2	176 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	SEPT14	Q6ZU15	432 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	VSIG10L	Q86VR7	867 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	CYP2W1	Q8TAV3	490 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	TMEM60	Q9H2L4	133 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	EHMT1	Q9H9B1	1298 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	POLR3E	Q9NVU0	708 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870		Q9Y3F1	56 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	MYH15	Q9Y2K3	1946 aa		13.97	□□□□□ -0.17
PTPN7-205	ENST00000464870	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	SYNRG	Q9UMZ2	1314 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	MYH7B	A7E2Y1	1941 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	NKRF	O15226	690 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	ADCY6	O43306	1168 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	SLC37A4	O43826	429 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	ADAMTS4	O75173	837 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	YEATS4	O95619	227 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	CYP3A4	P08684	503 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	TXN	P10599	105 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	COL6A1	P12109	1028 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	ZNF76	P36508	570 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	USP11	P51784	963 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	PTGDR	Q13258	359 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	SLC39A14	Q15043	492 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	GNAS	Q5JWF2	1037 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	XRRA1	Q6P2D8	792 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	TLK2	Q86UE8	772 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	C4orf32	Q8N8J7	132 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	PCSK9	Q8NBP7	692 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	DPF3	Q92784	378 aa		13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	TSEN34	Q9BSV6	310 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	UPF3A	Q9H1J1	476 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	GNE	Q9Y223	722 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-205	ENST00000464870	PLXNA1	Q9UIW2	1896 aa		13.95	□□□□□ -0.18
PTPN7-205	ENST00000464870	FRMPD4	Q14CM0	1322 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms