RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 MEIS2O14770 477 aa29.8■■■□□ 2.36
U2AF1-206ENST00000464750 F2P00734 622 aa29.8■■■□□ 2.36
U2AF1-206ENST00000464750 PSEN2P49810 448 aa29.8■■■□□ 2.36
U2AF1-206ENST00000464750 PTGISQ16647 500 aa29.8■■■□□ 2.36
U2AF1-206ENST00000464750 OTOP2Q7RTS6 562 aa29.8■■■□□ 2.36
U2AF1-206ENST00000464750 CDX2Q99626 313 aaPredicted RBP29.8■■■□□ 2.36
U2AF1-206ENST00000464750 CDH23Q9H251 3354 aa29.8■■■□□ 2.36
U2AF1-206ENST00000464750 GRXCR1A8MXD5 290 aa29.79■■■□□ 2.36
U2AF1-206ENST00000464750 STAM2O75886 525 aa29.79■■■□□ 2.36
U2AF1-206ENST00000464750 HOXD8P13378 290 aaPredicted RBP29.79■■■□□ 2.36
U2AF1-206ENST00000464750 HSDL1Q3SXM5 330 aa29.79■■■□□ 2.36
U2AF1-206ENST00000464750 GDF6Q6KF10 455 aaPredicted RBP29.79■■■□□ 2.36
U2AF1-206ENST00000464750 INPP4AQ96PE3 977 aaPredicted RBP29.79■■■□□ 2.36
U2AF1-206ENST00000464750 ALG1Q9BT22 464 aa29.79■■■□□ 2.36
U2AF1-206ENST00000464750 CNTNAP5Q8WYK1 1306 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 PITPNM1O00562 1244 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 BFSP2Q13515 415 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 MFSD10Q14728 455 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 RETREG2Q8NC44 543 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 TIFAQ96CG3 184 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 VWCEQ96DN2 955 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 PBX4Q9BYU1 374 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 MLXIPQ9HAP2 919 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 RBM28Q9NW13 759 aaKnown RBP29.78■■■□□ 2.36
U2AF1-206ENST00000464750 BRPF3Q9ULD4 1205 aa29.78■■■□□ 2.36
U2AF1-206ENST00000464750 PFKMP08237 780 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 ICAM3P32942 547 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 KIAA0753Q2KHM9 967 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 DEFB128Q7Z7B8 93 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 C7orf31Q8N865 590 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 SLC17A8Q8NDX2 589 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 CTAGE1Q96RT6 745 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 PSTPIP2Q9H939 334 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 RTEL1Q9NZ71 1219 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 HDAC6Q9UBN7 1215 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 GTF2IRD1Q9UHL9 959 aa29.77■■■□□ 2.36
U2AF1-206ENST00000464750 HAS3O00219 553 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 ZBTB43O43298 467 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 FIBPO43427 364 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 PBX2P40425 430 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 SEMA3FQ13275 785 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 RTN1Q16799 776 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 PCNX4Q63HM2 1172 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 HEATR3Q7Z4Q2 680 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 CCDC155Q8N6L0 562 aa29.76■■■□□ 2.35
U2AF1-206ENST00000464750 PPFIA4O75335 1185 aa29.75■■■□□ 2.35
U2AF1-206ENST00000464750 NEFLP07196 543 aa29.75■■■□□ 2.35
U2AF1-206ENST00000464750 HMGB1P09429 215 aaKnown RBP29.75■■■□□ 2.35
U2AF1-206ENST00000464750 RFC2P35250 354 aa29.75■■■□□ 2.35
U2AF1-206ENST00000464750 XRRA1Q6P2D8 792 aa29.75■■■□□ 2.35
U2AF1-206ENST00000464750 CAGE1Q8TC20 777 aa29.75■■■□□ 2.35
U2AF1-206ENST00000464750 MYLIPQ8WY64 445 aa29.75■■■□□ 2.35
U2AF1-206ENST00000464750 TET1Q8NFU7 2136 aa29.75■■■□□ 2.35
U2AF1-206ENST00000464750 KLF18A0A0U1RQI7 1052 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 GOLGA8AA7E2F4 631 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 GOLGA8BA8MQT2 603 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 ZBBXA8MT70 800 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 SPATA31C2B4DYI2 1134 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 IQCF3P0C7M6 154 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 UBE2SQ16763 222 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 KCNB2Q92953 911 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 BCAS3Q9H6U6 928 aa29.74■■■□□ 2.35
U2AF1-206ENST00000464750 NEDD9Q14511 834 aa29.73■■■□□ 2.35
U2AF1-206ENST00000464750 DHX38Q92620 1227 aaKnown RBP29.73■■■□□ 2.35
U2AF1-206ENST00000464750 NOP56O00567 594 aaKnown RBP29.72■■■□□ 2.35
U2AF1-206ENST00000464750 CPA1P15085 419 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 HSPA4P34932 840 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 FGD1P98174 961 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 RAB30Q15771 203 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 WWC2Q6AWC2 1192 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 METTL7BQ6UX53 244 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 AFAP1L1Q8TED9 768 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 JAKMIP1Q96N16 626 aaKnown RBP29.72■■■□□ 2.35
U2AF1-206ENST00000464750 C16orf70Q9BSU1 422 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 ZNF576Q9H609 170 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 SLC4A7Q9Y6M7 1214 aa29.72■■■□□ 2.35
U2AF1-206ENST00000464750 CYFIP1Q7L576 1253 aa29.71■■■□□ 2.35
U2AF1-206ENST00000464750 NLRX1Q86UT6 975 aa29.71■■■□□ 2.35
U2AF1-206ENST00000464750 MSRAQ9UJ68 235 aa29.71■■■□□ 2.35
U2AF1-206ENST00000464750 NAP1L2Q9ULW6 460 aaPredicted RBP29.71■■■□□ 2.35
U2AF1-206ENST00000464750 SNX14Q9Y5W7 946 aa29.71■■■□□ 2.35
U2AF1-206ENST00000464750 SPDYE3A6NKU9 549 aa29.7■■■□□ 2.35
U2AF1-206ENST00000464750 LGALS2P05162 132 aa29.7■■■□□ 2.35
U2AF1-206ENST00000464750 ACTN1P12814 892 aa29.7■■■□□ 2.35
U2AF1-206ENST00000464750 FOSL2P15408 326 aa29.7■■■□□ 2.35
U2AF1-206ENST00000464750 FUT2Q10981 343 aa29.7■■■□□ 2.35
U2AF1-206ENST00000464750 GRIN2CQ14957 1233 aa29.7■■■□□ 2.35
U2AF1-206ENST00000464750 MYO9BQ13459 2157 aa29.7■■■□□ 2.34
U2AF1-206ENST00000464750 REC8O95072 547 aa29.69■■■□□ 2.34
U2AF1-206ENST00000464750 RCAN1P53805 252 aa29.69■■■□□ 2.34
U2AF1-206ENST00000464750 NAPAP54920 295 aa29.69■■■□□ 2.34
U2AF1-206ENST00000464750 RBL2Q08999 1139 aa29.69■■■□□ 2.34
U2AF1-206ENST00000464750 BLOC1S2Q6QNY1 142 aa29.69■■■□□ 2.34
U2AF1-206ENST00000464750 LRRC8DQ7L1W4 858 aa29.69■■■□□ 2.34
U2AF1-206ENST00000464750 FTOQ9C0B1 505 aaKnown RBP eCLIP29.69■■■□□ 2.34
U2AF1-206ENST00000464750 SELPP16109 830 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 CDC27P30260 824 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 ZNF200P98182 395 aaPredicted RBP29.68■■■□□ 2.34
U2AF1-206ENST00000464750 PTK7Q13308 1070 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 TYW1BQ6NUM6 668 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms