RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 SMARCA1P28370 1054 aa22.49■■□□□ 1.19
MCF2L2-206ENST00000464626 IRX6P78412 446 aaPredicted RBP22.49■■□□□ 1.19
MCF2L2-206ENST00000464626 GPNMBQ14956 572 aa22.49■■□□□ 1.19
MCF2L2-206ENST00000464626 KIAA0753Q2KHM9 967 aa22.49■■□□□ 1.19
MCF2L2-206ENST00000464626 TJAP1Q5JTD0 557 aa22.49■■□□□ 1.19
MCF2L2-206ENST00000464626 LRRC8DQ7L1W4 858 aa22.49■■□□□ 1.19
MCF2L2-206ENST00000464626 SPZ1Q9BXG8 430 aa22.49■■□□□ 1.19
MCF2L2-206ENST00000464626 NCOR1O75376 2440 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 STAM2O75886 525 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 DDAH1O94760 285 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 GGPS1O95749 300 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 CXCL10P02778 98 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 ZNF286BP0CG31 522 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 UBA1P22314 1058 aaKnown RBP22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 SP2Q02086 613 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 PTK7Q13308 1070 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 HSDL1Q3SXM5 330 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 FCHSD1Q86WN1 690 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 HERC6Q8IVU3 1022 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 ATXN2LQ8WWM7 1075 aaKnown RBP22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 SPATA33Q96N06 139 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 ALG1Q9BT22 464 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 LY9Q9HBG7 655 aa22.48■■□□□ 1.19
MCF2L2-206ENST00000464626 CA3P07451 260 aa22.47■■□□□ 1.19
MCF2L2-206ENST00000464626 CKBP12277 381 aa22.47■■□□□ 1.19
MCF2L2-206ENST00000464626 POU3F3P20264 500 aaPredicted RBP22.47■■□□□ 1.19
MCF2L2-206ENST00000464626 IGFBP4P22692 258 aa22.47■■□□□ 1.19
MCF2L2-206ENST00000464626 ICAM3P32942 547 aa22.47■■□□□ 1.19
MCF2L2-206ENST00000464626 KIF5BP33176 963 aa22.47■■□□□ 1.19
MCF2L2-206ENST00000464626 ZNF654Q8IZM8 581 aa22.47■■□□□ 1.19
MCF2L2-206ENST00000464626 KIF28PB7ZC32 967 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 TRIM71Q2Q1W2 868 aaKnown RBP22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 GNPTABQ3T906 1256 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 TMTC2Q8N394 836 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 CTCFLQ8NI51 663 aaPredicted RBP22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 PPM1EQ8WY54 764 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 INPP4AQ96PE3 977 aaPredicted RBP22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 LZTS2Q9BRK4 669 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 C16orf70Q9BSU1 422 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 PRDM6Q9NQX0 595 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 THEGQ9P2T0 379 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 PTPRSQ13332 1948 aa22.46■■□□□ 1.19
MCF2L2-206ENST00000464626 MRPS9P82933 396 aaKnown RBP22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 CNKSR3Q6P9H4 555 aa22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 CASC1Q6TDU7 716 aa22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 GPKOWQ92917 476 aaPredicted RBP eCLIP22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 RRP36Q96EU6 259 aaKnown RBP22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 TMEM87BQ96K49 555 aa22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 LSG1Q9H089 658 aaKnown RBP22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 MLXIPQ9HAP2 919 aa22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 PRRC2BQ5JSZ5 2229 aaKnown RBP22.45■■□□□ 1.18
MCF2L2-206ENST00000464626 PIK3CDO00329 1044 aa22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 PRC1O43663 620 aa22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 NBNO60934 754 aa22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 MCM5P33992 734 aa22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 KCNJ6P48051 423 aa22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 GNAQP50148 359 aa22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 WDR5P61964 334 aaKnown RBP22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 TRAF7Q6Q0C0 670 aa22.44■■□□□ 1.18
MCF2L2-206ENST00000464626 ABHD14A-ACY1A0A1B0GW23 586 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 SPATA31C2B4DYI2 1134 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 SH2B2O14492 632 aaPredicted RBP22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 EFCAB14O75071 495 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 HOXC8P31273 242 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 LIFRP42702 1097 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 TAP1Q03518 808 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 NEDD9Q14511 834 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 XRRA1Q6P2D8 792 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 METTL7BQ6UX53 244 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 SERINC5Q86VE9 423 aa22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 ZFP91Q96JP5 570 aaPredicted RBP22.43■■□□□ 1.18
MCF2L2-206ENST00000464626 H3BRB1 525 aa22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 FIBPO43427 364 aa22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 HIC1Q14526 733 aa22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 CCDC85BQ15834 202 aaPredicted RBP22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 WNT8BQ93098 351 aa22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 ASB2Q96Q27 587 aa22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 ESYT1Q9BSJ8 1104 aa22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 MYL10Q9BUA6 226 aa22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 TUT1Q9H6E5 874 aaKnown RBP22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 SEC63Q9UGP8 760 aaKnown RBP22.42■■□□□ 1.18
MCF2L2-206ENST00000464626 REV3LO60673 3130 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 MEIS2O14770 477 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 SLC27A2O14975 620 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 SORBS3O60504 671 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 LGALS2P05162 132 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 CALM1P0DP23 149 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 CALM2P0DP24 149 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 CALM3P0DP25 149 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 ZNF200P98182 395 aaPredicted RBP22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 SEMA3FQ13275 785 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 NECTIN1Q15223 517 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 ZNF618Q5T7W0 954 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 PCNX4Q63HM2 1172 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 SMARCC2Q8TAQ2 1214 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 PIBF1Q8WXW3 757 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 CUL5Q93034 780 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 USP26Q9BXU7 913 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 MUC3AQ02505 3323 aa22.41■■□□□ 1.18
MCF2L2-206ENST00000464626 EMSYQ7Z589 1322 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms