RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 KRT1P04264 644 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 GNAT1P11488 350 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 NCAM1P13591 858 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 RAP1GAPP47736 663 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 AMIGO3Q86WK7 504 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 MIB1Q86YT6 1006 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 PCDH19Q8TAB3 1148 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 FBXW5Q969U6 566 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 TRIM39Q9HCM9 518 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 CD320Q9NPF0 282 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 FANCLQ9NW38 375 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 SIT1Q9Y3P8 196 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 PCDHA8Q9Y5H6 950 aa8.77□□□□□ -1.01
PTCD3-205ENST00000464541 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
PTCD3-205ENST00000464541 NPTXRO95502 500 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 ASMTLO95671 621 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 ASGR2P07307 311 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 C8AP07357 584 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 FAM47CQ5HY64 1035 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 ATG14Q6ZNE5 492 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 BRAPQ7Z569 592 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 MILR1Q7Z6M3 343 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 TRIM48Q8IWZ4 208 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 SIGLEC10Q96LC7 697 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 SGPP1Q9BX95 441 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 NGRNQ9NPE2 291 aaKnown RBP8.76□□□□□ -1.01
PTCD3-205ENST00000464541 PCDHB4Q9Y5E5 795 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 PCDHA9Q9Y5H5 950 aa8.76□□□□□ -1.01
PTCD3-205ENST00000464541 RAPGEF3O95398 923 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 C1QTNF9P0C862 333 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 PMLP29590 882 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 C16orf59Q7L2K0 433 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 IGDCC3Q8IVU1 814 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 UHMK1Q8TAS1 419 aaKnown RBP8.75□□□□□ -1.01
PTCD3-205ENST00000464541 PIP4K2CQ8TBX8 421 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 PDGFDQ9GZP0 370 aaPredicted RBP8.75□□□□□ -1.01
PTCD3-205ENST00000464541 PCDH18Q9HCL0 1135 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 MYOTQ9UBF9 498 aa8.75□□□□□ -1.01
PTCD3-205ENST00000464541 B4E1Z4 1266 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 IGFBP6P24592 240 aaPredicted RBP8.74□□□□□ -1.01
PTCD3-205ENST00000464541 EPHB3P54753 998 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 GIMAP6Q6P9H5 292 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 ETV3LQ6ZN32 361 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 ZC3H7AQ8IWR0 971 aaKnown RBP8.74□□□□□ -1.01
PTCD3-205ENST00000464541 FAM126BQ8IXS8 530 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 SCLYQ96I15 445 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 FEZ1Q99689 392 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 KCNJ15Q99712 375 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 IRAK3Q9Y616 596 aa8.74□□□□□ -1.01
PTCD3-205ENST00000464541 TCRBV5S2A0A599 114 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 TCRBV16S1A1N1A0A5B0 115 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 PPP1R12AO14974 1030 aaPredicted RBP8.73□□□□□ -1.01
PTCD3-205ENST00000464541 ST5P78524 1137 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 CACNB2Q08289 660 aaPredicted RBP8.73□□□□□ -1.01
PTCD3-205ENST00000464541 GPR19Q15760 415 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 ANKLE2Q86XL3 938 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 TTLL11Q8NHH1 800 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 CELF4Q9BZC1 486 aaKnown RBP8.73□□□□□ -1.01
PTCD3-205ENST00000464541 INTS7Q9NVH2 962 aaKnown RBP8.73□□□□□ -1.01
PTCD3-205ENST00000464541 ASH2LQ9UBL3 628 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 SMG5Q9UPR3 1016 aaKnown RBP8.73□□□□□ -1.01
PTCD3-205ENST00000464541 PLAAQ9Y263 795 aa8.73□□□□□ -1.01
PTCD3-205ENST00000464541 RFXAPO00287 272 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 BUB1BO60566 1050 aaPredicted RBP8.72□□□□□ -1.01
PTCD3-205ENST00000464541 RASGRP1O95267 797 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 ASLP04424 464 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTCD3-205ENST00000464541 KCNA10Q16322 511 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 PLEKHG4Q58EX7 1191 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 KIAA0907Q7Z7F0 614 aaPredicted RBP8.72□□□□□ -1.01
PTCD3-205ENST00000464541 B3GNT8Q7Z7M8 397 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 ZC3H18Q86VM9 953 aaKnown RBP8.72□□□□□ -1.01
PTCD3-205ENST00000464541 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 DSEQ9UL01 958 aa8.72□□□□□ -1.01
PTCD3-205ENST00000464541 IGFALSP35858 605 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 CRY1Q16526 586 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 ZNF385BQ569K4 471 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 TAF7LQ5H9L4 462 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 FGD2Q7Z6J4 655 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 NLGN4XQ8N0W4 816 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 NLGN1Q8N2Q7 840 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 CATSPERZQ9NTU4 200 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 HSPBP1Q9NZL4 362 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 MAGEC2Q9UBF1 373 aaPredicted RBP8.71□□□□□ -1.02
PTCD3-205ENST00000464541 CNOT6Q9ULM6 557 aaKnown RBP8.71□□□□□ -1.02
PTCD3-205ENST00000464541 FAN1Q9Y2M0 1017 aa8.71□□□□□ -1.02
PTCD3-205ENST00000464541 CCDC66A2RUB6 948 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 SRGAP2CP0DJJ0 459 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 ATF2P15336 505 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 HSD3B2P26439 372 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 EPHA5P54756 1037 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 NCKAP1LP55160 1127 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 LINC00310P59036 64 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 LACTBP83111 547 aaPredicted RBP8.7□□□□□ -1.02
PTCD3-205ENST00000464541 CAP1Q01518 475 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 SDE2Q6IQ49 451 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 NINJ1Q92982 152 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 YIPF4Q9BSR8 244 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 BCAS3Q9H6U6 928 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms